NONHSAT105581
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105581 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
553 nt |
Genomic location |
chr5-:178804532..178805762 |
Exon number |
2 |
Exons |
178804532..178804929,178805537..178805762 |
Genome context |
|
Sequence |
000001 GCAGGCAGCT GCTCTGCCCG AGACTGTCAG GAGTTGGTGG ATGTGAATCC ATGTCTGAAG CCCAAGCTCT CACTACTCTG 000080
000081 CTGTCTCCCT GAGGGGTGCA TGAAGGCCCC AGCCCAGCCA GTGACACAGA GGTTGGGAAG ACCAGGGCGT GAAGCTTCTG 000160 000161 TGCTTGGAGA ACAGGAGGGC TTGTGGAGCT GTGGTTGATG GCGTGTCCAG GAAGCCTGGC CAGGCTGGGG TCTGGCAACA 000240 000241 GCCTCACCAC GATGGCATGG CGGTGGGCCC GGCCTCTACC CGCTGCGCCA CAGCTCCTGG CTCCTGGCTC CAGGTCATCT 000320 000321 CTGCCCACAG CCAGTGTCTC TGGTGAGCCT GGGCAGGTGG GAGGCCGAAG CTGTGCCCCA CTGGTTTGGA TGCTGAGCTC 000400 000401 TGGGGTGACC TGCACCCTGT AGTCCTACAG TTCACACGCT ATGGATGCCT GAAGGGATGG GTGTCCCGTT TCTGAAACCC 000480 000481 ACAGAGCAGC CTTGATTGGG AGGCGTCCTG TGCCCATCTC GTGCCCCCCG TCCTTCTCCT GCGTCCAGGT TCT |
Predicted Small Protein
Name | NONHSAT105581_smProtein_197:421 |
Length | 75 |
Molecular weight | 7481.6194 |
Aromaticity | 0.0405405405405 |
Instability index | 78.7567567568 |
Isoelectric point | 10.3862915039 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0274784588511 |
Amino acid sequence | MACPGSLARLGSGNSLTTMAWRWARPLPAAPQLLAPGSRSSLPTASVSGEPGQVGGRSCA PLVWMLSSGVTCTL |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLL LEEEEELLLEEEEL |
PRMN | - |
PiMo | - |