NONHSAT105589

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105589

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1760 nt

Genomic location

chr5+:178971224..178972983

Exon number

1

Exons

178971224..178972983

Genome context

Sequence
000001 cctcccaaag tgctgggatt acaggtgtga gccaccgcgc ccggccCATT TTACttttta ttatgaaaac tgagacattc 000080
000081 agagaagtaa acagaatata actcttttat actcattacc taaatttaaa agttttcaac aatttgccat ttttgcatca 000160
000161 tctattttat tttttggaag tattttaagg tgaggtctag acatcctgac atgctgctac ttaagagact aatgcagctc 000240
000241 ctaaaaagaa gggaattttc ctatgcaagc acaatccatt atcacatcta acagaattta cagtaattcc ataatatcac 000320
000321 ctagtatcta gcccatattc aaagttcccc aattaaaaaa tgtctttccc agcagaTTGC TCTGATCTCA TCAGGGTTGT 000400
000401 CTCTTGGGGT TTACAACAGG TGCTGTTTTC ACTTCCTCCT TTCTCCTCTA CGTTTTCTGC AAACTGGAAG CTAGATCTCA 000480
000481 AGctgtgctg gccagtacag tagtcaccag gcacatataa atttaaatta attgaactga agtaaaattc agctcctcag 000560
000561 tcatgcaaac cacatgtcaa gtgctcagta gctgcttgtg gccactggct atcttactgg acagtgcaaa tgaaaaacat 000640
000641 tcccatcacc tcagaaggtt ttgttggaca gtgctgCTCC AGATACCTGA TGTGTTTTTA AGCAAACTTT TTTTTTTTTT 000720
000721 TACCATTTTG CTTTTCATGA TCATACCTCA GACTTAAttt tttttttttt tttgagacag agtcttgctc tgttgctcag 000800
000801 gctggagtgc agtggcacga ccttggctca cttcaacctc cacttcccag actcaagcga tcctccagcc tcagcctccc 000880
000881 aagtagctgg gatcacaggt gccagccacc acgcctggct aatttttgtg ttttgtagag ataggttttc accatgttgc 000960
000961 ccaggctagt ctctactcct gaatcaaaga aatccgtccg ctacaacctc ccaaagtgct gacactatag gcgtgagcca 001040
001041 ccgtgcccag ccTAGGCAAA CATTTTTGGC AAGAAAACTT CATATAGCAT CGTTCAGAAA ATGATTTCAC Tggctgggcg 001120
001121 tggtggctga cacctgtaat cctagcactt tgggaggccg aggtggacag atcacttgag gtcaggagtt agagagtagc 001200
001201 ctggccaaca tggtaaaacc ctgtgtctac taaaaataaa aaaattccga gtgtggcggc aggtgcctgt agtctcagtt 001280
001281 tacgggctga gggtggagaa tcgcttgaac caggaggcgg aggttgcagt gagctgagat tgcactattg cactccaggc 001360
001361 tgggcgacag caagactccg tctcaaaaaa aaaGATGGTT TACAGCGAgg tgcggtggct cacgcccgcc tgtaatacta 001440
001441 gcactctggg aggttgaggc gggcagatcg cttgagtcca ggagttcagg accagcctga gcaacatgga aaaaaaccgt 001520
001521 ctctactaaa actacaaaaa ttagctggac atggtggtgc acacctgtaa tcccaggtac tcagaaggct aaggcagggg 001600
001601 aatcacttga gcctaagagg cacagtttgc agtgagccga gatcgcacca ctgcactcca gctcgggcaa cccagcaaga 001680
001681 ctctgtctca aaaTatatat atataactaa aaaatgctgg ccgggcgcag tggctcactc ctgtaatccc agcactttgg 001760
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Predicted Small Protein

Name NONHSAT105589_smProtein_359:502
Length 48
Molecular weight 5359.2024
Aromaticity 0.148936170213
Instability index 53.2765957447
Isoelectric point 5.78961181641
Runs 7
Runs residual 0.0173404255319
Runs probability 0.0323516794106
Amino acid sequence MSFPADCSDLIRVVSWGLQQVLFSLPPFSSTFSANWKLDLKLCWPVQ
Secondary structure LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLEELHHHLLLLL
PRMN -
PiMo -