NONHSAT105614

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105614

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2296 nt

Genomic location

chr5+:179094877..179102346

Exon number

2

Exons

179094877..179096772,179101947..179102346

Genome context

Sequence
000001 ctgggaggcg gaggttgcag tgagctgaga tcacagcact gcacttcagc ctgggtgaca gagcgagact ctctcaaaaa 000080
000081 caaaacaaaa TTTCTTTTTC TTTGATTTTC tttttgtaga gatgggagtc tcattatatt gcccaggctg gtcttgaact 000160
000161 tcttgcttca agcgatcttc ctgccttaac ctcccaaagg gctgggatta caggcgtgag ccactgcacc tggccTAAAA 000240
000241 TATCTTTCTG TAATTCAATC TGTAGGTCAA ACCTGCCACT CTAATGTAGT GGTAGAAACT GAATTTCAGT TAATTTGGAG 000320
000321 GTTTTCCTGT CTTTCCCACA GGGGTATGGC ACTGTCAGCG GAAGACTGTC AGATCTCTGC AGCATGACCC TCATCCTTGT 000400
000401 TCCCAACCTT TTCTGTCAGT CACTGTCTGC CTCCCTTTCT TTGGTTGGCT GCCCATCAat gacctattat catcattgcc 000480
000481 atagatccct gagaagcact ccccctccca cagttgccat tccaatcttg ctacacagta taagagccct cttggcttct 000560
000561 gagggttaaa tgttgccatc cagaatggtt aaatgccatt ccagaatcgt gtcatcccca agacactaag gagccaagtt 000640
000641 ccatggcagc atctcctagc cacagagcac agccaccacc agctttctat gacaccagtg ccccctcacg tccacattct 000720
000721 gcattgcctt agtgaagagc gcctcctctg ggcagctcca tgaaacacct tctggtctca tgtaataaat ccgttctaac 000800
000801 attcccactt ccctgagcct tcatctctac ctcattaatg gtaggccact atggtgtcca agcttccggg agccgtctgg 000880
000881 cgtgaagaca agctccagct gtcctttgac aggactttaa atcctgagtc ttggggcatg cacccttgtc aatcaatgcc 000960
000961 ccaccggtct tctattgccc cctccccgcc tggatctggt accccacctg gatctggtac cctcatgatc gctcccgcaa 001040
001041 gtgttctccc aggtcctgca actttttggg tgactgagtg atttcctcct agggtaggaa atatttcact gcttgggcta 001120
001121 tgctgagatg tgatcctgct tgttggtctg gaggcaatga gaggaggtgg atcttgagga ggattagtgt tatcttacag 001200
001201 ggtactcacc tgtaacgggg agatctctgc actgtctcca ggctagatga agctgtcctc ctctgtcaat gggaagaagg 001280
001281 cagtttctgc tggccaggat gcttcagggg actctggggg ctcaaggttc tttggtacat ccacccaaac atcccacgtc 001360
001361 aggcctagag tcccatttat tcctttaaaa gcacccaatg ggccggttac tgtggctcat gtctgtaatc ccagaagttt 001440
001441 gtgaggccat ggcaggtgga tcagttgagg ccaggagttc gaaaccagcc tgaggaacat agcaagatcc ccgtctctac 001520
001521 aaaaataaaa atAAtagaag cccccacttt agtacaggag acctgctgag gatgcacaag tgtcttttgc agctctgctg 001600
001601 ctcttgtgat gaaatattgg ttctcatttt cagcatgctc tgcctcctgg ccacggaagc aaggttttct ttacatgttg 001680
001681 tcttgggaga gttcctgcct ttcacagcat actctgagta gatagcaggc tgaactgcat ctttcattct cttgcttcaa 001760
001761 agctgctaag gtgatttaga aaagctagcc acctccataa tccttGCAAC AGCAGCTGCT TCCACATCTT TCAAGTGACA 001840
001841 AAGCTACTGC ATAAGCCAAG CTTTCTCTTC AACTTCTATC TCCTTATCTA CCACAGacgg agtctcgctc tgttgcccaa 001920
001921 tctgcaatgc gtggcacaat ctcagctcac tgcaacgtct gcttcccagg ttcaagaaat tctcccacct cagcctcccg 002000
002001 agtaactggg attacaggct tgtgccacaa cacctggcta atttttgtat ttttagtaga gacggggttt caccatgttg 002080
002081 gccaggcagg tctcgaactc ctgacctcag atgatccgcc tgccttggcc tcccaaagtg ctgggattac aggtgtgagc 002160
002161 caccacacct ggccCTCATC TCTCCTCTTG CTTGACAAAC CTACACAGCC TTTTTGACCT GCCTCCTCAA ACCCAGAAAT 002240
002241 ATttttgcaa agctctattc cccagaggat tctgagctgt aggaggtgaa agccag
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Predicted Small Protein

Name NONHSAT105614_smProtein_383:568
Length 62
Molecular weight 6615.79
Aromaticity 0.0491803278689
Instability index 65.2081967213
Isoelectric point 8.65997314453
Runs 12
Runs residual 0.0439042773695
Runs probability 0.0283298003887
Amino acid sequence MTLILVPNLFCQSLSASLSLVGCPSMTYYHHCHRSLRSTPPPTVAIPILLHSIRALLASE
G
Secondary structure LEEEELLLHHHHHHHHLLLEELLLLLEEEELLLLLLLLLLLLLEEEHHHHHHHHHHHHLL
L
PRMN -
PiMo -