NONHSAT105625
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105625 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
745 nt |
Genomic location |
chr5-:179226506..179227589 |
Exon number |
3 |
Exons |
179226506..179227068,179227184..179227259,179227484..179227589 |
Genome context |
|
Sequence |
000001 CGGAGATCCA TTCTGGGCTC CTGGAGGTCA TCTCACCCTC CCCCCACTTC TACCCTGACT TCTCCCGCCT CCGAGAGTCC 000080
000081 TTTGGGGACC CCAAGGAGAG AGTCAGGTGG AGGACCAAAC AGAACCTCGA TTACTGCTTC CTCATGATGT ACGCGCAGTC 000160 000161 CAAAGGCATC TACTACGTGC AGCTGGAGGA TGACATCGTG GCCAAGCCCA ACTACCTGAG CACCATGAAG AACTTTGCAC 000240 000241 TGCAGCAGCC TTCAGAGGAC TGGATGATCC TGGAGTTCTC CCAGCTGGGC TTCATTGGTG TGCCCCTCCC CTTACCTGAC 000320 000321 GGTGCCTTTC AGTCCCACCT GCCTCTGCCA TCCTCTCTCC CAGTCCCACT GTGTCCACTG TGAGCCTTTG CCCAGGTGGG 000400 000401 CCCTGCCTGG TGTGCGTGCT ACAGCCCCAC CTGGCCTGTT CTCATTGCCT GTGCATCAGA CATGTCTGCC CTCATCACCT 000480 000481 GTCTGCCTCC CTGCCCCGTT ATGCCCACAC CTGCCTGAAG CCTGCCCCTG GGTTTGCTGT GGGACTCGGG GGCCGCTGCA 000560 000561 GGGAGAAAGG AAGTAGGCAG AGCAGCACTG CCCACTCAGG CCCCTCCCCA CCAGGTAAGA TGTTCAAGTC GCTGGACCTG 000640 000641 AGCCTGATTG TAGAGTTCAT TCTCATGTTC TACCGGGACA AGCCCATCGA CTGGCTCCTG GACCATATTC TGTGGGTGAA 000720 000721 AGTCTGCAAC CCCGAGAAGG ATGCG |
Predicted Small Protein
Name | NONHSAT105625_smProtein_143:382 |
Length | 80 |
Molecular weight | 8841.2277 |
Aromaticity | 0.113924050633 |
Instability index | 73.5253164557 |
Isoelectric point | 4.37933349609 |
Runs | 13 |
Runs residual | 0.0242760534073 |
Runs probability | 0.01617001617 |
Amino acid sequence | MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGVPLPLPDG AFQSHLPLPSSLPVPLCPL |
Secondary structure | LEEEELLLEEEEEELLLEEELLLHHHHHHHHHHLLLLHHHHHHHHHHLLEEELLLLLLLL LLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |