NONHSAT105650
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105650 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1907 nt |
Genomic location |
chr5+:179289110..179291133 |
Exon number |
2 |
Exons |
179289110..179289402,179289520..179291133 |
Genome context |
|
Sequence |
000001 gtcaatctct taaggtgcct aattcataaa cttaatcaca ggtatgtatg cataggaaaa aacagtatgt ataaggtttg 000080
000081 ttattatctg tggttttaga catccactgg gggtctggtt ttagatatcc actgtatccc ctgtggataa gggggtaact 000160 000161 gctgTATCTT TTAGTAGAAG CAAGAGCAGC CCCATGTGGG GGCTAACACT GGACACTGGT CAGTTTCAGC TCCTCATGCA 000240 000241 AAGTGAGGGT ATCCTTGTGG CTCCAGCCCT GGGGCCCCCT GCGGTCACCT TTGGGCATCC CCTGATGCAG GTTGGTCAGG 000320 000321 ACCTGCCCAG CTTGCACCAG CAGGTTCTGC GTCTCCATCT GACCTGGCAG ACCTTGCACT CTTCCACCCA CTGTGGAGGA 000400 000401 CTAAGTGTCT TGAACTTCCA GAACACAGCC AGGGCCCCAT ACTTGGCCTG GGGAGAAGTT GGGAGGCCTA AGCAGTGGTT 000480 000481 GGGGGCCACA GCAAGGCATT GCACACAGTG GTTTTTATTT CTTTCAGGGA TTTATTAAGG CATTGAGCAC AGTGTAATTT 000560 000561 CTAGCCAAGT GAAATGAATC CAAGGAAATA TATCAGGACC TGAGGGATGT TTTTTTAAAG TTACTGGAAA GGATGATGAG 000640 000641 CTGAGAGCAC GTGTACAGCC ACGCCTGTGC GCAGCGCCCA CTCTGTGCAA TAAACATGTT CTGCCCATGT TCCTCAGTCA 000720 000721 GGAGGTTCAG GCTCCCGGAG AGCACCTGAG GGTTCCATCA CTTTGGTGCC CAACAAGCAC ATGCCCCCCA ACCTGGTGCC 000800 000801 AAGAGGCAGG AATGACCCCC ATACCACATA GCTGCAGGAA AGCATCCACG GATGGAGGGA CTCAGCTGGC CTGGCCGCAG 000880 000881 TGTGGAGCAC AGAGGTATGA GGCAAGCAAG GGCAGATCTG AGAGCCTGTA ATGCTAGGCA GGTGCAGCTG GTGCGAGGCG 000960 000961 GGCTCCCACC AGGTGTAAGG AAGGTGGGAG CCACAGCCTC TTCCTGGGCC CAGAAGCAGC CGGCGCCAGG AGATGCAGGC 001040 001041 CCAGGGAATC TGTCTAAGGC AGCTGGGTCT GCACCAGCCT TCTTTCCACT CACAACTCAC TGCTCCTGGG AGAGCAGGAG 001120 001121 GGGCACACCT TTAAAGAGAA ACTGATAAGG GAGGAAAGGC AGGAGGAGAT GAGGCCAGCC CCACTGATGA CACCTTGGGC 001200 001201 CAGGCCTCAC AGCTGCAGGC ATCAGCCGGA AACTCCAGGC TGCTCATGGT CACTGGCGGT GCTGAACTGT CTCTCCACTT 001280 001281 TCTTTTGGTC CTTGATCTTG AGTCCAATGT CCACTCTCTT CTCAAAGAAG TTCACCAGCA CGGACTCCGT CAGGATGGAG 001360 001361 GCCAGGATCT GCTCAAAGGA GATGCACCAG TCGGTGTCGA CGGTGCCGCC GATGCGCGCT GTGGGGCTGC AGGCCTCCCC 001440 001441 GCCCACCAGC ACCGTGTCGT CTGCAAGGTC TTCACATTGC AGGGAGCCCG TGCTGACCAC CGAGTAGGAG GACATGGACA 001520 001521 TGTCGTCTTT GGTTTCATCG TCAGACAGCA GCTGGGAGGG TGAGCCCTGT CCCTCGCCGC TGCCCCCCTC CACCACCACC 001600 001601 TGGCTCTCCT GTGGGGCTTT TCCGAGGTGT GTGTCTCCGC CTGCTTTGGC TTGGGGGTCT CCTGCAGCTG GGGGCTGAAG 001680 001681 CTCCCTGGCT GCGTCCTGAT GCAGTTCGGG TGCTGGTGGC TCGTCCTCCT CAGTGGCACA GTCCCTGGGC TTCCTGCCTG 001760 001761 TGCGGGCTGA GAACTTCTTC CCCACCTCTC CGATGCGGAG CAGGAGGCTG GCCACGGTGG CGATGGCGTG GTACAGGTCC 001840 001841 TGCTCCATGG GGTCTTCACT GAACATGTTG TAAAGCGTCT TGCACAGCTC AATGAACTGC TCCTTTT |
Predicted Small Protein
Name | NONHSAT105650_smProtein_851:1144 |
Length | 98 |
Molecular weight | 10316.6088 |
Aromaticity | 0.0515463917526 |
Instability index | 48.3680412371 |
Isoelectric point | 11.594543457 |
Runs | 13 |
Runs residual | 0.00248186330661 |
Runs probability | 0.0300640006522 |
Amino acid sequence | MEGLSWPGRSVEHRGMRQARADLRACNARQVQLVRGGLPPGVRKVGATASSWAQKQPAPG DAGPGNLSKAAGSAPAFFPLTTHCSWESRRGTPLKRN |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHHHLLLEEEEEELLLLLLLEEELLEELHHHHLLLLLL LLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |