NONHSAT105689
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105689 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1169 nt |
Genomic location |
chr5+:180014932..180016100 |
Exon number |
1 |
Exons |
180014932..180016100 |
Genome context |
|
Sequence |
000001 CATCCTTGgg ctgggcgcca tggctcatgc ctgtagtccc agcactttgg gCATGGCATT CTTGCCTTTG AGGGGTCGAC 000080
000081 TTcagttgtc ttatacgtcc ctgctgaagc atgtgtacct tttccctgtg atatacaaac cctgggtctg ggagttgacg 000160 000161 gtgtggggat gcaccgcctc aaggccatcc gagacatagc ttctgttttc aagtccccat taaatgtttc tttgtgagat 000240 000241 actggacttg tcagactctt tttgacccct tagctccctt ggtctttggg ggcaggtctg catatacctg ctcactgaag 000320 000321 agcaGTATGT TTGGGACCAG TATCTCCAGG ATTATGATGG TCTCTCTTCC AGGAATCTAC AGGAGGAAGG AAGCTAGACG 000400 000401 TTGCAGCTGG TCTTGGAACT TCAACTGGTG TTCGCAGTTT CCCTTTTTCA CTAAGCACTT TGCTTTCCCC CCGTTGTTTT 000480 000481 CCTGGAAAGA TTCCAGGGGT GGAGGGTAGC AGGGCCATCT CGGGATGGGG TCCTTCATCT AGTACCACAT AGTACCACAG 000560 000561 CCCACCCACC GTCAGTTCCA CCAAGCTCCC GTAGCCTACC ATGTTCTCAT AATGATTTAC CTGGATGTTT TAATCCAGTT 000640 000641 AGTTAAGGAA TTGTTAGCAG ACAACCTGCA GAAAGCCTGG ATATGTAATA CTGGGGGAGG TGGGCCTGGG GTCGTGCTGA 000720 000721 GGTCGGTGTC CCCATGACCT TGTGATTCTC ACTCTTGGTT CCTGTTGTCC AGACCAAAGC CTTCCCCACC CCATGAAGAT 000800 000801 TCACAGCCCT TCATGACCTT GGGGGCAACG TGTTGCTCAG ATTTCATGGA ATCTGGATCC AGGTGGCTTC TTCCCTGTTG 000880 000881 TGGTTTGACT GTGAACTCAT CAAAATGGCT AAAATtttta ttttattgta ctatttatgt attttgagac ggggtatctc 000960 000961 tctgctgacc aggctggagt gcagtggtac agtcacggct cactgcagcc tgacctgtct ggctcaagtg aacctcagcc 001040 001041 tcccgagaag ctgggattac aggcacacgt caccatgccc ggataacttc ggtacttttt tttttttaga cggagtctcg 001120 001121 ctctgtcacc agcctggagt gcactgacac gatcttggct cactgcaac |
Predicted Small Protein
Name | NONHSAT105689_smProtein_326:508 |
Length | 61 |
Molecular weight | 7142.2168 |
Aromaticity | 0.216666666667 |
Instability index | 49.225 |
Isoelectric point | 10.9160766602 |
Runs | 10 |
Runs residual | 0.0169326241135 |
Runs probability | 0.0308691043986 |
Amino acid sequence | MFGTSISRIMMVSLPGIYRRKEARRCSWSWNFNWCSQFPFFTKHFAFPPLFSWKDSRGGG |
Secondary structure | LLLLLEEEEEEEELLLEEEHHHHHHLEEEELLLLLLLLLLLLLLLLLLLLLLEELLLLLL |
PRMN | - |
PiMo | - |