NONHSAT105969

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105969

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2812 nt

Genomic location

chr6-:142272..145083

Exon number

1

Exons

142272..145083

Genome context

Sequence
000001 CCTGCCTGTG GTAGTTATGG AGACCCCCAG GTGTTGAGGC AGGGCTGGGG TGTCCCCTTC CAACCAGGCT GTCAAGGCCC 000080
000081 CAACTCTGGG GCAGAGGCAG TGGCAGGGCA GCCAGGTTTG TGCCAGAGCC TGAGCAGGTT GAGGTGGGGT CAGGCAGGGC 000160
000161 TGGGAGTCAG GGCAGGGGCA GCAGCAGTGG ACCCGCTATG CACACATCTT CTTCTCCAAG GTTTGTGTGC AGAACATCCT 000240
000241 GCCCATGCTG ACCCAGCAGC TTCAGTTGGC ACCTGCCCCA GTCCAGCCTC TGGGAACCAT GCAGCAGCTC CCAGCGGCCC 000320
000321 TGCACCCACC ACCAGCATCC GTTTCACCTG CAGTTGAAGA TCCGTGAGGT GCCCAGAAGA TCATGCAGTC ATCAGTCCCA 000400
000401 CGGAGCAGCC CGCGAGGCTG AGGCTCCTCC CACTGGACCG CCCCCCAACT GGCACCACTG CTGCCCCTGC CCCTACTCTC 000480
000481 AGCCTCACGT GACTCTCGGG CAGAGGCAGT GGTGGGGCAG CCAGGGCAGC GTCAAGAGTC TGAGCCAGGT GAGGTGCGGT 000560
000561 CAGGACCCCC ACAGGGCTGG GAGTCAGGGC AGGGGCAGAA CAAACCTTGG AGGGGAAGAT GTGTGCATAG TGGGCCTGGA 000640
000641 GGGCGGCTGT GGCCTAGTGG ACAGGAAGAA GCAGTGGGCC TGGAAGAGCT GCATGATCAG GGCCGGCACT GGTCCAGGGC 000720
000721 ACGTGCAGTG AAGAGGACAG CTCCTTCTCG GTCTCCGGTT CCCTGAGCCT GTCCTCGGCT TCTCCACCTG TACAGGCAAA 000800
000801 GGGGAAGCTG TCCCCATCAC ACATGGCACA CTTGGGGGTG TTGGGCTTTG GACTGCAGCT GGAACATCTT CTCATCTTGC 000880
000881 ATTTGGGCGT GGTGGGGTCC TCCAGTGTGG GATCCATGTC CGTGGGGTTC CCTCTGCCCC GACCCCTAAA GCCCAGTCAG 000960
000961 TTTCTCTTCA GGCTCTGCTC CCCGGGTGGC TCAGCCCAGC TCCTGCCTAG GAAAGCCTTA GTGTTGGGAG GGACCCTGAT 001040
001041 GACTGAGGAG CCTGGTAGCT CCAGGTCGCC CACACTTTCA GGTCTCTTGC ACCAGAAGGT GGCAGGATCC ATTGGGAGGA 001120
001121 AACAGGCCAC CTTGGAAGGC GTCCCTGGGC CCCCATCCCC AGGGGTTGGG GCCGTAGGGG GCCCGCTCTG CTGCGTTGAC 001200
001201 CAGACTCCTG GGCTTTGAAG GCTCCTGGGC CCAGTAAGAA GGAGGTGGGC GCCAAGGTTG AGGAGGAAGC ATCCGAGTAT 001280
001281 GTGTAGGAGG AGGACAGGGT GTGACCATAG ACTGCCAAAA GCTGCAGGTG GATCGGGGGA CGCTGGGGGC TCAGGATCCA 001360
001361 GCAAGGGGCG GCAGGAGTAA AGGAGGAAGG AATGACAGGT GCAAATACCT TCCCACCAAA GCCCTTGTTG CCCTCTGGCT 001440
001441 CCTCCCCAGA GCTGTCCCCA CTCTCAGTCG GTCACCCACT CCTTGAACTT GAGATCGGTG TCGGTGGTGC TAAAGCCATC 001520
001521 ATCAGCAATG ACATCATCAC CCCCTCCTCC TCATGGATGA CCGTGTGCTC CTCGTCACTC GCTGTGTCCT CACTGGCCAT 001600
001601 GTGCTGGGAA TGAGCAGCTC AGGTGGGCAG CAGCAGGGCT GCCCACGGGT CACCTCCCTC ACCAGGGGCT GCAAAGTGGC 001680
001681 CTGGAGCTCC ATGCTGAGTA GAAGGCTTTG GGCCAGAGTA TGATGCAGTG CCAGACACCA CCTGTGTCAG TTCCCGTAGT 001760
001761 GCCTGACGGT CTATTTCCCT GCCGTCCAGG CTGTGTACCC CGCTGTGGGA GAAGGCTTGG GCCAGGCTGA GCCAGGTTCC 001840
001841 CTGACTGTGT GCAGCCGTTC TGCCCCACAG AAGCTGCTCC TTGGCATCCG AGCTCTGGAG TGTTTGGGCT GCAACTGACA 001920
001921 GGAGTTCAGA GGACGCCCCA GGGGCAGTGG CAGTGCCCGT CTCTGATATG CTCCGCTCCC ACGAGCCCTT GTTACACTGC 002000
002001 TGCTAGCCCC TGGCTTGTGG GCTTGGCCTC TGAGCTGGAC TTCTTTCGGT CCTTGTTGCA AGTGGGCCAC CTTCACCTGG 002080
002081 AAGGCCAGGT CGTATTTCTG CATCTCACTG GGCCCCAGGG TGTACCACCG CTCGCTCAGC ATCTGGCTGA CGGTCCGGTT 002160
002161 ATCCTGGTTG GGGTGACCCT GGTGCGCCCC GCCAGGGCCT GGTGCCGCTT GCTGAAGATC ATGAGCGCCA CTCATGGGCC 002240
002241 ACCAGATGTG GTCCTTGTCC CATTTGTTGG GGCTGCGTCC ATCCTTCTCA GAAGATGAGT CCTGTTCCTT GCGCAGGGCA 002320
002321 CTGAGGGACT GGGCCTGACA TCATCTGAGT GGTAGAGGCA ACTGGGTGTC AGGAGACATG ATGGAGAGGA AAGCATCATC 002400
002401 ATGGTCATTC TCTGTCTCAC TGTCCAGCAG GGACTCCCCT GAGGGGCCCA GGGCTCCTCC TCCATGGTGG GAGGTGAGCT 002480
002481 TTTACCAGGT TCCACCACCC CCAAAGTGTG TGGGGTTGCG GGCCCTGGGC TTTCAGGGCA GGTGGCTCCA GGGGGCCGCC 002560
002561 CAGGGTCAAC ACTCCCTGTC CCACCTGGTG GACGCTCATG AGCAACAGCT GGCAACTTGG CAGGTTGTTT TCTCTGGTTG 002640
002641 CAGGCCACTG AGTGACTGGC AGGTTGCTGG GCCTCGTGTG GCTGCAGGGA GGGGTCAGGA AGGGGATGGA GTACCAGGGG 002720
002721 AACACAGCCG CAGAGTGACC TTCCACATTC CTCCACACGA ACATGCTGAC GCCACGGGAG GCCTCACTGA ACGCAGGCCT 002800
002801 GGGGGCCGAG TA
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Predicted Small Protein

Name NONHSAT105969_smProtein_1391:1612
Length 74
Molecular weight 7469.5623
Aromaticity 0.041095890411
Instability index 56.6164383562
Isoelectric point 4.73077392578
Runs 12
Runs residual 0.0202386212992
Runs probability 0.0427265500796
Amino acid sequence MTGANTFPPKPLLPSGSSPELSPLSVGHPLLELEIGVGGAKAIISNDIITPSSSWMTVCS
SSLAVSSLAMCWE
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLEEEEELLEELLLLLEEEEEE
HHHHHHLHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHH
HHHHHLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTT
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