NONHSAT106302

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106302

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2249 nt

Genomic location

chr6-:961241..1101567

Exon number

4

Exons

961241..961568,962375..962528,1005633..1005763,1099948..1101567

Genome context

Sequence
000001 CTTAGTAACA CCCAGGTTAG TCCTACTTAA TTCTTACCTG CAGCCAAAGT GGACTTAGCA TCTCCTTGCA TGCCTGGTAA 000080
000081 AGTCAAGGGT TTTCAGCCAG GGCCTGTGTA TAAAGCAGAA GCAGCACAGA GTCTGGTTTG AAGCTTAGTG CTTGGGTTCA 000160
000161 GACAGTTGTG GGTTACAATC CCTTCTACAC ATGTTCTCTG TGGAAACCAT TTGGTTCTCT GTGCTTGGAA CTCGCCTGCA 000240
000241 ACGGGACAAA GCCATCTCAC CTAGACTGTT GTTATGAAGA TTGAATTAGG TGATTCTGAG AGGCATTTAT GCGTCCTCCC 000320
000321 TGAGTAACAA TCCATGAAAA GTGGGCGTCA TTGCTGAAGC TCAAGGAAGA AATATGAAAT TTGATTATAT CCTTATTCAC 000400
000401 GGCATTGGGT CACCAACTCA GCACTTTTTA TGAAAGTAGC ATCTGACCTG GCAAAGGCTG TGTCATCTTA TTACCTCAGA 000480
000481 AAGACAAATT TACGGGGTCA GACGATGGAT GGCTTGTAGA TTTCTCAATG GGCTGGAAGG AAGGAGAGAA AAAGAGAGAC 000560
000561 AGGAGAGAGT ACACATTTAA TTCTGCTTCC CCTAGGGTGA TATTTCCTTC CTCCCCTTCC AGGGTTCTCA AAAAGGCATT 000640
000641 CTAGGAAGTC CTGTAAAATA CATGCTCATA AAAATCTCAT AATTTCCACA AATTGTTGAG AATTTAAAAC TCGGTTGGGA 000720
000721 GTTTGCTGTT TCAGCCTGAG ACACCGGGGT CACGTTTCAG TGCCTGCAGT CTTGAGACAG TACCAGGCAT CTGGGATGAA 000800
000801 GCTGAGGAAA GAAGATGTGG GGGCCCTGCT GGCCTGCTCC TTCTCTCGAA AGACGCTTAC CGGCTGCTGG TGTGTCACAG 000880
000881 GGCTTTAGGA TTTGGAAAAA CAGAGGGATT TAAAAGAAGA TAGAATGGTC AGAATTTCGA GAACTGTGTG CTGAAGTGTC 000960
000961 ATCTTTAGGG TGCTCGTAAC ACGGCCTTAC AACATTAGAG GTGCTGGAAT CATGGAAGAG GCATCTGGAC TCTGTAATGT 001040
001041 CTTTCCCCCT GGAAAATCTG CTCCAGAAGT GGGGTATTGG GAGCTGTCAA CATATGAGCC ATCTTTTGCT CCGTTCAAGA 001120
001121 TGGTAGGGGC ATTCTCAACA TGCCCCTCAC TCTGATTCTG CCTCACTTTT ATTTTAGAAT TTTCCACTGC CTTTTCTGGA 001200
001201 ATGTGCTTTT TCAACCCTCA AAATCTGTAG AGAAGAAATA AGCAGAAACC GAAATGGCTT TCTGGTGTTC TCCATGCTCT 001280
001281 CAGCTTACTG GAAAATCGAG CCGCAGGCTC GAGGCTGGAC TTTAAGGCAG AGCACTGCAA TTATAGTGCT ATGGCCTTGG 001360
001361 CTTCCTTTCT CATCACCCAG GTACAGTCCT GCAGTCCTCA GAGGATGCCA GTCCCACACA GGGGGATCCT TCTCCATAGG 001440
001441 AAAACCGAGG AACAATGCAG GTTCGAGGTG CACAGTGGCT AAGCACACTC AGTCCTCAAG ATCTTTCCTC TCAAATGCTA 001520
001521 ATGCTACCTT CAGATGGGCT GCTGCCTGCT ACCATTTCAA CATTGAGTCC TTTAAGATGC CATCAGAGAG AGGGGAAGCA 001600
001601 AGAGGCCAAG AAAAATGAAA GGCCCTGCAT GTTTTTCTTC GGGAAGGCTG TGCAGTCTGC TCTGAGGAGA CAGATCAACC 001680
001681 TAGCCCTTCT CCAGGACGAA CTCCGAAAAC CACAGGAATT CACGTTCAAA GGATGACGCA TCTCAGAATC AGTGAATTTT 001760
001761 AGGAAAATGA CTCGATAACT GCAACGGTGA TGTCATGTGT GTGTCTACTT TAGAGAGCAG ATGGTCGATC TGGTGCTAAT 001840
001841 TTGCCCAATA CGGTAGCTAC GCGGCAATGA AATTCCAAAA CTGGCACAAG GCGGGCCTGG TTCCAGGATT TCCACGAAAC 001920
001921 TTGTGGGGCT ACAGGCCAGT GGAACACTTC CAAAGGGCTT GACACCAGGC CAATGGCCTT CTTAGAACAC TGTCATCATT 002000
002001 GATTCTGTAT CTACAGAAGT CATGTAACTG TGGCTGCCTC TTTTCAATGG AAACAGAGCG AAATACAACC TGGTCAGCTA 002080
002081 AATCGTGCTG ACCTTAAAAA CACTGCATCC TCTTAGGCAA CCACTTTGGC TTATAAACCA CATGTACAAT ATTCCTGCTA 002160
002161 CTTCAAACAT GACTTTTTTA ATGAGCCAAA AAAAAAAAAA ATCTAAGTTT GTAAATAAAC CGAATTCATT GCCAAAAAAA 002240
002241 AAAAAAAAA
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Predicted Small Protein

Name NONHSAT106302_smProtein_1454:1735
Length 94
Molecular weight 10575.1991
Aromaticity 0.0645161290323
Instability index 71.7204301075
Isoelectric point 9.77703857422
Runs 14
Runs residual 0.0196136997212
Runs probability 0.0285916168269
Amino acid sequence MQVRGAQWLSTLSPQDLSSQMLMLPSDGLLPATISTLSPLRCHQREGKQEAKKNERPCMF
FFGKAVQSALRRQINLALLQDELRKPQEFTFKG
Secondary structure LLLLLLLHHHLLLHHHLLHHHEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLH
HHHHHHHHHHHHHHHHHHHHHHHLLLLLEEELL
PRMN -
PiMo -