NONHSAT106372

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT106372

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2308 nt

Genomic location

chr6-:1099363..1131273

Exon number

3

Exons

1099363..1099638,1099948..1101761,1131056..1131273

Genome context

Sequence
000001 GTCAGGTTTT TCTCTGTTTA AGTGGCTACA GCTGAATAGC TCAGGCCAAA CTTAAAGCTC ACACTTGAGA CTTGACGTGC 000080
000081 TCAGCTCCTG CTAAAGAGGC TCCAGGGCAG CGCCTGCCTT TCCGGGAAGC TCCCCTGAGG GTCACCGAGG CTGCAGAGAA 000160
000161 CACCCGGTGA TGACTGCATG GATCTCCTTC ATCTGCTGGG ATTCAAGCTG TGTTGCTGGG TCCTGCCTAC CCATCTGAGG 000240
000241 ACATGTCTGC TCATCACCCA TGTGCATTCT GTCACAGTGG GACCTGTGTG TGTTCCCTGC TCATTGTCGT TTCCATGGTT 000320
000321 TTGCTGATTC TATGCGATTC TTCCAGGCCA CTCCAAGTTC CACCTCTTCC ACGAAGCCCT CCTTGATTGC TGGGCCCTGG 000400
000401 TTGAACTCCT TATTAGTAAC ACCCAGGTTA GTCCTACTTA ATTCTTACCT GCAGCCAAAG TGGACTTAGC ATCTCCTTGC 000480
000481 ATGCCTGGTA AAGTCAAGGG TTTTCAGCCA GGGCCTGTGT ATAAAGCAGA AGCAGCACAG AGTCTGGTTT GAAGCTTAGT 000560
000561 GCttgggttc agacagttgt gggttacaat cccttctaca catgttctct gtggaaacca tttggttctc tgtgcttgga 000640
000641 actcgcctgc aacgggacaa agccatctca cctagactgt tgttatgaag attgaattag gtgattctga gaggcattta 000720
000721 TGCGTCCTCC CTGAGTAACA ATCCATGAAA AGTGGGCGTC ATTGCTGAAG CTCAAGGAAG AAATATGAAA TTTGATTATA 000800
000801 TCCTTATTCA CGGCATTGGG TCACCAACTC AGCACTTTTT ATGAAAGTAG CATCTGACCT GGCAAAGGCT GTGTCATCTT 000880
000881 ATTACCTCAG AAAGACAAAT TTACGGGGTC AGACGATGGA TGGCTTGTAG ATTTCTCAAT GGGCTGGAAG GAAGGAGAGA 000960
000961 AAAAGAGAGA CAGGAGAGAG TACACATTTA ATTCTGCTTC CCCTAGGGTG ATATTTCCTT CCTCCCCTTC CAGGGTTCTC 001040
001041 AAAAAGGCAT TCTAGGAAGT CCTGTAAAAT ACATGCTCAT AAAAATCTCA TAATTTCCAC AAATTGTTGA GAATTTAAAA 001120
001121 CTCGGTTGGG AGTTTGCTGT TTCAGCCTGA GACACCGGGG TCACGTTTCA GTGCCTGCAG TCTTGAGACA GTACCAGGCA 001200
001201 TCTGGGATGA AGCTGAGGAA AGAAGATGTG GGGGCCCTGC TGGCCTGCTC CTTCTCTCGA AAGACGCTTA CCGGCTGCTG 001280
001281 GTGTGTCACA GGGCTTTAGG ATTTGGAAAA ACAGAGGGAT TTAAAAGAAG ATAGAATGGT CAGAATTTCG AGAACTGTGT 001360
001361 GCTGAAGTGC CATCTTTAGG GTGCTCATAA CACGGCCTTA CAACATTAGA GGTGCTGGAA TCATGGAAGA GGCATCTGGA 001440
001441 CTCTGTAATG TCCTTCCCCC TGGAAAATCT GCTCCAGAAG TGGGGGATTG GGAGCTGTCA ACATATGAGC CATCTTTTGC 001520
001521 TCCGTTCAAG ATGGTAGGGG CATTCTCAAC ATGCCCCTCA CTCTGATTCT GCCTCACTTT TATTTTAGAA TTTTCCACTG 001600
001601 CCTTTTCTGG AATGTGCTTT TTCAACCCTC AAAATCTGTA GAGAAGAAAT AAGCAGAAAC CGAAATGGCT TTCTGGTGTT 001680
001681 CTCCATGCTC TCAGCTTACT GGAAAATCGA GCCGCAGGCT CGAGGCTGGA CTTTAAGGCA GAGCACTGCA ATTATAGTGC 001760
001761 TATGGCCTTG GCTTCCTTTC TCATCACCCA GGTACAGTCC TGCAGTCCTC AGAGGATGCC AGTCCCACAC AGGGGGATCC 001840
001841 TTCTCCATAG GAAAACCGAG GAACAATGCA GGTTCGAGGT GCACAGTGGC TAAGCACACT CAGTCCTCAA GATCTTTCCT 001920
001921 CTCAAATGCT AATGCTACCT TCAGATGGGC TGCTGCCTGC TACCATTTCA ACATTGAGTC CTTTAAGATG CCATCAGAGA 002000
002001 GAGGGGAAGC AAGAGGCCAA GAAAAATGAA AGGATAATCC TGAGTTTATA GAATTTCATC ACAGTGTGTG AAACTGGTTT 002080
002081 TTAACTTCAC TATACTGGCC CTCAGCGGTG GAGTCAACTG GGCACTGAAT AGAAAAATCT CCCTCCTCCG TGTTGTCCCC 002160
002161 AGCCCACCAC ATTTCGCCCT AAGCTCTGCC CTGCACCAAC ACCAGCCTTC TTCTGGAGTT TGGCAGCTGT GGCAACTGCT 002240
002241 GGCTGTCTCT CAACCACTTC ACAATATGTA TCAATGTATT CTACAAATCA TTGTATTTGC CAAGCATT
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Predicted Small Protein

Name NONHSAT106372_smProtein_1865:2050
Length 62
Molecular weight 6803.8656
Aromaticity 0.016393442623
Instability index 63.568852459
Isoelectric point 9.18341064453
Runs 10
Runs residual 0.0111173921236
Runs probability 0.0192545486663
Amino acid sequence MQVRGAQWLSTLSPQDLSSQMLMLPSDGLLPATISTLSPLRCHQREGKQEAKKNERIILS
L
Secondary structure LLLLLLHHHHLLLLLLLLHHHEELLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLHHHL
L
PRMN -
PiMo -