NONHSAT106392
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106392 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1056 nt |
Genomic location |
chr6-:1186623..1187678 |
Exon number |
1 |
Exons |
1186623..1187678 |
Genome context |
|
Sequence |
000001 AGAGAGGTCA AAGTCAGCCA CGGGACAAAT GGAGAGGACT GCAAATGACA AACTTATTTT GGAGAGATAT GTGGTGTGCA 000080
000081 TTAGTAGGCA TGGCTGAGAG TTCCCAGAGG CTGAGGCCAT CCCTTTAAGG ACTGAAACCA TAATGTCAGC TGTTGTTGAT 000160 000161 GTTCATGTCC TACACACTGT TAAATATTGC TAAGCTTTGG GAGGAAATGT TGGCCCCATC ATATGTCACA GTCAACCCGG 000240 000241 GGCAGTCTCT GTTTATGCTG ATGGTCCCAA GCTCATTATT AACAGCACCC CTTTCATTCT CAAAAGTCTA CTTGTTTGGA 000320 000321 AAGTGCCTGG TATGATCACA CCAGATAAGG AAAGTGGATG TTGCTGCTTT CTTTTTACAT ATCAGAGATA CCTCAAGCTT 000400 000401 TGAGGTGCTC CTCTCCCAAC TTTAAGGCTC TCTTAAAATA TCTTTTTATA TCTTTAATAT GCTCACATTT TTCTCCACCT 000480 000481 TCTTGAACAT ATGGAATGTA GTTATAACTG TTTTGATGTC CTTGTCTACT AACTCCTGCA TCTATGTTAT TTCTGGGTCT 000560 000561 GTTTATGTTG ATCAGTTTCC CTCCCGCTCA TTGTCCATTA TGTTCCCTTG CTACTTTGCA TGTCTGGTAA TTTTTGAGTG 000640 000641 GATGGCCAGA TGTAATTTTT ATCTTGTTGG ATGTCAGATA TTTCTGTATT CTTTTAAGTA TTCTTGGTCT GTTCTGGGAC 000720 000721 ATACTTAAGT TGCTTGGAAA CAGTTAATCT TTTTGAAGTT TGCTTTCAAG CATGGTTAGA TGGAACCAGA ACAGCCTTTG 000800 000801 GTGCAGGGAT TTTTTTTTTT CCAAGTCAGA TGGGTGATGT GCCGACATCA TAACGAGGTT TGAGGGAGGC ACATCTCACA 000880 000881 CATGAGCAAA AAACCCAATC ATCACACTTA TGAACCACAA AAGAACCTGG TCTAGGGGTA CTTTTTTCCT TTTGAGGGCA 000960 000961 CGACCATGTA TTACAAGATT TCTCCACTCT GCTATGGGGA CATCAAAGTT CCTTGCCCCT AGCTCAGGGA TGATTCCACC 001040 001041 CACTCACTCC TGATGG |
Predicted Small Protein
Name | NONHSAT106392_smProtein_458:727 |
Length | 90 |
Molecular weight | 10363.1617 |
Aromaticity | 0.213483146067 |
Instability index | 42.3551685393 |
Isoelectric point | 7.60650634766 |
Runs | 15 |
Runs residual | 0.0253359770875 |
Runs probability | 0.023346876288 |
Amino acid sequence | MLTFFSTFLNIWNVVITVLMSLSTNSCIYVISGSVYVDQFPSRSLSIMFPCYFACLVIFE WMARCNFYLVGCQIFLYSFKYSWSVLGHT |
Secondary structure | LEEEHHHHHHHHHHEEEEEEEELLLLEEEEEEEEEEEELLLLLLEEEELLHHHHHHHHHH HHHHHLEEEELEEEEEEEEEEEEEEELLL |
PRMN | LLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHHH HHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | ooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiTTTTTTTTTTTT TTTTTTTTTTTTToooooooooooooooo |