NONHSAT106410

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106410

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2551 nt

Genomic location

chr6-:1219324..1233001

Exon number

6

Exons

1219324..1220776,1221922..1222157,1222291..1222411,1222507..1222842,1229424..1229678,1232852..1233001

Genome context

Sequence
000001 CTGCATGTTT ACAGTGGGGA CTGTCCTGTG CACTGTAGGA TGTTTAGAAC ATCCCTATCC TCTATCCACT GAGTGCCAGG 000080
000081 AGCACCCCTT CCTTCAACTG TGATGACCCA AAATGTCTGT AGACATTGCC AGATGTCCCC TTGATGGGGT TTCCCATTAG 000160
000161 GCTGAGCTCC TCATCCGCAG GGGTTGAGAC TGGTTCGTCT TTGCGTGTTC AGTGCCTGGC ACATAGTGGG CAGTCCATCT 000240
000241 TATTGAAAGA GTCAATGTCT TCCATGTATT TTGCCACCTG AAATCCATAG CACAGAGCTA GAGTTATAGC AGGTGCCAAT 000320
000321 AAACACATGT TGATGAATTG TTAACTGATG AAATGAGAGA AAGGAGAAAC ACCCTTGCTT GTAATCTGGT GACAAATTGG 000400
000401 AACCCCTCCC ACTCACAGGG GGGAGTGTGG AAAATGAGCT TGCTCCTACT CTCATGAGAG AAATCAACAG TTTTGATAAT 000480
000481 TGCTACAAAA GTAGTAACAA TCCTCCCAAA ATGACTTTAG ACAAACAAGA GCAACAAAAC CAAGATTTAA CATTATCATT 000560
000561 ATGATTAACG AAATTTATGC AACCCATAAG GCTAACTCTC AGGTGGAAAG AAAATTCTAT TGAAAACTAA CAACTCTGGT 000640
000641 CTCAGTTCTT TTTAAAATCG GAGTTAAAGA GCATAATTGG ATTGTTTGCA ACTCACTTGA TAAATGCTCG AGGAGGTAAA 000720
000721 TACCTGGTTC TTCATGATGT GAACAAAAGA AAAGTAAAAT TGGAATTAAA GGAATACTTT AGGCAACTCA CTTCACCAAT 000800
000801 ACTGGCCTCA GATTGCTAAT CTTGTACAAA CTGGGGGTGG TGATTGGAAA AGGTGATCAC TATGAATTTT AAGACAGGCT 000880
000881 ATATATTTAC AAAGAAAATA AATTTGCCAC TAAATCCTTT TTGAAACAAG GTGGGTATAA ACAAACGGTT AGACACAAAG 000960
000961 TTTTATTTCA GGTAGACATC ATAAATTTGG ATGATGGTCA TCCTTGACCC AGATTTCTGG ATTTTGTTAA AAATGTGGAA 001040
001041 AATACTTCTG CAATTACAGT GGTTGGATTT TGGTTTCCTG AGAATGTAAC AAGTTTTAGG CTCTCCAATT ACCTTAGCCA 001120
001121 TTCTGATGGC TCTCCAATGG ATGCATCACA GCCATTTCAA ACTCAGCACA TCCAAAGTGT CATAACACAA CTGGACTCTT 001200
001201 TTTTCCCCAC ACAGTTCGGT TCCTTTTCCA ATGCCTTTAT TTCCATGAAT GGTGTCATTA TTTTTCTAAC TGAGTAGTTT 001280
001281 TAGAACCTTG AAACAATATT CTGTATTTTT TCTCTCTCTT CTCGTATATT GGATGATGGC GATTCCTTGC TGTGTCTGTA 001360
001361 AGACTTCACA TCAGTCCTCA ATATACTGAT AAGTTTCTCC TAAACAGGAC TGATAATGCT GATATCAAGT TGGAACGATT 001440
001441 TGACCAGGAG CCCCAAGACA AGACCGCATC AAAACTAGAA TAACTGTAAT ACTTTAAATC AGCCTTTGCC TCAAAAGTAA 001520
001521 CTTCCGGGGC CTATTCTTGT CCATCTGTCT TACCATCCAT CCATCCATCC ATCCATGCAT CCATCCATCC GTCCATGCAT 001600
001601 CCACCTCCCT ACCTTCATAC CTACAGACTG ACCCATCTAT GTCTCAACAT TGTGGACGTT TGGACTGGAT ACATCTGTGT 001680
001681 TGGGAGGGCT GTGCTGTGCA TGGTAAGATG CTTCACAGTA TCTGTGACCT CTGCATACCA TGAGCCAGCG GCACCCCCTC 001760
001761 CTCAGTTGTG GCAACACGAA ATGCCTCCAG ACATTGCCGC ATATCCCATG GGGGCTGAAT CTGTCCCCTG CTTGAGAACC 001840
001841 ACTGCTCTAT CCTATCTCCA GTGCCACTCT ACAAATTCCG TAAAACTGTT GAAAATATGT ATCATTTTAT TCTAAAATAT 001920
001921 GCTAGTAATG TCTTTTCAAA TTCAGTCTTC TGGAGTCAGT GTTATAATAT TCAGCATGAA TTTACCATCT CTATTTATTT 002000
002001 ACTTACTTTA AAAGGCCAAG TGGAGAAATT TTTGGACGAC CCTTATCTGT AGCTTCTGGT TAGAGAATTT AACATAATAA 002080
002081 GGTTTTAAAT GGCATCAAAT AAAGAGTTTT GCCCAATGGG AATTGGAAGG CATTTTATGT ATAAATGTCT TGGGTAAATC 002160
002161 ACCCAGGTCT GCCACTGTGC TTGTTCTGAG AAGCACATTT CAAAGGTTCT CTAAGATTTA AATTTTTCAG TTCTAAATGA 002240
002241 GAAGAATAAT TGTGTCTATC TCATAGGATT GTGGTAAGCA CTAAATGAAT ACTTCTAAAG CCCTAAAGCC CTGGACAGAG 002320
002321 GCCTGGCATA TTGTGACGAC ATGATGATGT CCACTCTCAG CTGGAAATAG AAATGGCAGG CTTGCTGTGG TTGAAGTGGG 002400
002401 GTGGGGGGTC TGGACCCACC CACGAAGACC TCCCCTTCAC ATGAGGCCCA GCTGCACTTT GGCATGGACC CAGCTACCAG 002480
002481 CTATGCTTGT CATCCTGTGG CTGCCCTCAG CTACTCCTGT GCAGAAGTCA GTGAGTGTGC ACCTATATCA T
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Predicted Small Protein

Name NONHSAT106410_smProtein_1136:1276
Length 47
Molecular weight 5171.7658
Aromaticity 0.152173913043
Instability index 44.1847826087
Isoelectric point 4.30987548828
Runs 9
Runs residual 0.0342908902692
Runs probability 0.0260947221731
Amino acid sequence MDASQPFQTQHIQSVITQLDSFFPTQFGSFSNAFISMNGVIIFLTE
Secondary structure LLLLLLLLHHHHHHHHHHHHLLLLLLLLEEHHHEEELLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii