NONHSAT106420

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106420

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2245 nt

Genomic location

chr6-:1261703..1269354

Exon number

5

Exons

1261703..1263424,1263860..1264061,1267917..1268090,1268218..1268336,1269327..1269354

Genome context

Sequence
000001 GTTACTATCA TTGTCCCACT TTATAGAGAG CTCTGGGGTT ATAGGCATGA GCCACCGTGC CCGGCCCAGC TAAGCCTTGA 000080
000081 AGGATGAGAG GAAACCAGAG TTCATCAGGA GGAGGCTGGG GAAAGCTAGG GCCCGGCACA CAGTGCACAA GGGCCAGCAG 000160
000161 TGATGTGAGG AATGCCAGGG CCGAGCTCAC AGAGGAAGCG AGGCGGCAGA GCTCCATGCT CCACCTCCAG GGTCTCAGTG 000240
000241 CCTTTTTTCC TGTGCAAAGT CGATATCCAC TGAGAGACTT CAGCGTTTGC CCCTAAGGCT CAGATAGGCC ACAGTGATTT 000320
000321 TTACTGACCT ATTTGTAATA ATTTTAGATG GCACTCTGAT CAGGAAGATT GTGGTTTTGC AAACACAGAG GGTTCTTACA 000400
000401 TCACTATTAT ATGGGGAGCC CTTCTTTCCT CTGGAATCCA AACTGATAAG CGGCATGTTT GTTGGTCTAC GGGAGGATTA 000480
000481 TGGGCTCCGT AGTTTTTTTC CTTTGGTTTG ATTGGAATGC TTTAGATGAG TCTTGGGGTG TCAGAGCCTA GAGGCCTCAT 000560
000561 CAGGGACCAT CCCCTGCTTT AAATCGGTCT TTCATGTGGC AGGGTTGACC AGCAGGGCAT GGGCACATTC ATCAATATTT 000640
000641 GCTAGAGCGG CGGGGCCATT GTGGCACACG CACAACACCA GGTTCACAGG CACAAATCAT GTGAAAGCAA ATTCATCTTT 000720
000721 CTTCTGACGG GGCCACTAGA CTGGTAGGTC AAGGAAATGC TGGAGCCACA GTGGTTGCAT CTGGCACAGT CTCTCGTGAT 000800
000801 GATATCCTTG TGTACAAAAT AAAGGCATGT GGGCCAGAGG TGGTTGGGGT GGCCGTTCCC TGGCAGGTCC AGGGAATACA 000880
000881 CCCAACAAAG GCTGGTCTAA GCCATGGCCA GCAGCGGCTT TCACAGACAC TTCTGGTGCT GAGCTGCGAG CCTTAACTGT 000960
000961 GTCCTGCTCA GTGGTAAACC ACACGTTTTG AAGGACAGTC AGGATCAGGA GCCGAAAGGG CCTCACAGCA CAGGTTAGAA 001040
001041 GAAAAGGCTG AACAAGACAG AAGGCCATTT TATTTTCTAA TTTTTATTTA TTTTTCATTG TATATTTTTA AGGCATGCAA 001120
001121 CATGATGTTT TGATATATGT ATGCATAGTG AAGTGAATGC CACAGTCCAG CCAGTTAACA TATCTGCTAT CTCATGTCAT 001200
001201 CACCGTCTTT TGCAATAAAA GTGCCTAAAA TTGACTCTCT TGCCAAATAT CCAGAGTATA AAATACAATA TTCTTATCTA 001280
001281 TTAATGTCTA CAATATTATT ATCATATTGT ATTAGAATGA CATTTTAAAA GGTTAAATAA AAAGGCTCTT CACTTGGGCT 001360
001361 CAAAGAATTA ACTGCACTAG TACCCCAAGG GTGCCATGGC GCTTAGTAGC AGTGAGGATG ACGAGAATCC AGGGCTTAGG 001440
001441 GCAGGAGGTG GTTTTCATAT GTTTGTTCCG TCCATCTTTG GCTACATTAT GGTGGAATAT TTCCTAGAAT GCTGCACTGC 001520
001521 CTCGCCTTCT CTGGGCTAGG GTAACCACTT TTGGAGTACT GGCATTCAGT TTTAGGCATC ATATTTAAGA AGACAAAGAC 001600
001601 AGAATAGACC CAAAGCACAG GGACCAGATT GCAAAAGGCC CTGACACTGC CTCCAGAAGA ATGACAGAGA ACCTAGAGGG 001680
001681 TTCACAGCTA CTATCGACTC TGAGGACCAA GGAAAACAGG GCAAAGCTTG TGTTGTAAGA CTACAAGGGC AGAAGTGGGG 001760
001761 TGGAAACTAA GAAATTCTCC AGCATTCAGA GCTGTCCAAG GCAGGATGGG CTGTCCTGGG AAGCAATGAG ATCTCATCAC 001840
001841 TCAGAAGCTT GGAAGTAAAC TGGGCCTGCA CCTGCTGCAT GTGGAAACAG TGCTTTAAGT ATTTTAGGGC TGGTTTGTCT 001920
001921 GGGCCATTCC TCCAAACCCT GGGATTCTAT GAGTCCATGA CGAGTCAAGA AACTGAGGAT CTAACCTTAG CTTTGCCACA 002000
002001 AACTATCTTA GTGACCTTAA GCAGAACATT TCAATCCTCT CCATCTCATT TTTATCCTCT GCTAAAATAA GAAGTTGGAC 002080
002081 AGGATTCCCT ACAATGTTTC ATTAATTCAT ATATTCTACC ACCTTTATCA CCATGTGCTG CAGTCTCTGC AAAGTGCTGA 002160
002161 TAGTTTGTGA TCTCCTCCTT CTTTCATGTA CACCAAGAAA GGGGTTTAGG AGATAATGTC TTAACTGACA TTGTAAGACC 002240
002241 TGCAC
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Predicted Small Protein

Name NONHSAT106420_smProtein_83:295
Length 71
Molecular weight 7629.4468
Aromaticity 0.0714285714286
Instability index 75.9142857143
Isoelectric point 10.0608520508
Runs 11
Runs residual 0.0123055162659
Runs probability 0.0408456584928
Amino acid sequence MRGNQSSSGGGWGKLGPGTQCTRASSDVRNARAELTEEARRQSSMLHLQGLSAFFPVQSR
YPLRDFSVCP
Secondary structure LLLLLLLLLLLLLLLLLLLLEELLLLLHHHHHHHHHHHHHHHHLHHHHLLLLLEEEELLL
LLLLLLEELL
PRMN -
PiMo -