NONHSAT106545

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT106545

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

4622 nt

Genomic location

chr6+:1739435..1746752

Exon number

7

Exons

1739435..1739570,1739800..1739957,1740270..1740480,1741077..1741352,1741460..1741576,1742168..1742215,1743077..1746752

Genome context

Sequence
000001 TCTTGGGTCA CAACATACTC ATTTCAGACC CTGGCTCTGC TACTCCCTTG CTGTGTGACC TGGGGAGAGC ACTGAACTGC 000080
000081 ACTGTGCCTC AGTTTCCTTC TCAGTGCAAT AGTGCCCCAG CCCTGGAAAT TAAACATCCA GTCCCACGCT GGCCACAGCG 000160
000161 ACAGGTCTAG GGATAACTGC AGGACCCACA AGGGCCAGCC ACAGTCCTTC CTCAGGATTT TTCTAGGTGG ATTGTTCTTA 000240
000241 AAGGTTCTAT TCCTCTTTTG ACTGTGTGAG GCTGTGTCCC CAGAAAGGCA GTCTTAAAAT GTCATGTTTG ATTCCTACAG 000320
000321 AGAACATAAA CAAAAGTGCA CATATTTTTT AAAGAATAAG ATGTTATGCT TACATCTTAT TTTTCTCATT AAACTTGTTT 000400
000401 AAGTATAATC TGTGTTATTC ACATATACAA TATAAATTTG TTAAAATATG TTAGAGAGTT ATTAAAAAAA GTAATTAATG 000480
000481 AGAGTGGCAG ATATTAATTT CTGCTGAAAA AGATCTTATT TTTGCCTTAA TTTTCTATAA TTAATGTCAT TAGTTTCCTG 000560
000561 CACAAAGTTT TCATGCAAAA CAAATTTATG TAACTCTTGG CCACGAATTG TCAATATTTT TCATAAAATT GGAAGTATAT 000640
000641 TGAGACAAAA TGTTCACAAA ATAATTGGGC AGTATCTCTT TTTCTGAGTG TTCTTATTTT TGTTTTTAAA ATTTTAATTG 000720
000721 ACACATTATA ATTGTACACA TTTATGGGGT ACATTTTGAT ATTTTGACAC ATGTATATGT TCAATAGGTA TTGTTAACCT 000800
000801 TAGACACCCT ATTGTACAAC AGAATACCAG AACTTATTTC TCCTATCTTA TTGTTACTTT GTACCCATTT ACCATTCTCT 000880
000881 CCCCAGCCTC TTTCCACCTT TTTTGAGATG GAGTCTTGCT CTTTCACCCA GGCTGGAGTG CAATGGTTTA TCCTTAACAT 000960
000961 CCCAGGTGAT TCTCATAGTG CAGGTCCTCA GACCACAACG TAGAGGAATG TGATGTGAAG CAGTGTCTAT GGCAAATAAC 001040
001041 CTTTTTATGG TATTATTTAC AAAAAGAGCA GTTCTAAAAG CACTGTTTAA TTTTTCTTCA TATCATAGAT AGTAGTCAAG 001120
001121 GAAAAAAACC ATTTAAAGAC AGGTATTTGT CCTCAAAAGT AGAACTTAAT TTTTGAACAA TAAAGTTGAG AAGGTACTAG 001200
001201 TCAAAAAACA AAGTAAGTGC GAATCATTAA TGGAAAAACA ACCACGTAAT GGAGAGTACT ACTATTATAA AAAAGCTGTC 001280
001281 TGAGAGGCAA TGAAAACATT TATCCCAGAG TTAATGGGTT CATAAGGCAG CATTTCAAGG CCAGGGGCTC AACTTCCACA 001360
001361 TCAAAATGGA TGTCTAGCAG GGCGCGGTGG CTCACGCCTG TCGTCCCAGC ACTTTGGGAG GCCGAGGCGG GTGGATCACG 001440
001441 AGGTCAGGAG ATCGAGACCA CGGGGAAACC CCGTCTCTAC TAAAAATACA AAAAAAATTA GCCGGGCGTG GTGGGGGGCG 001520
001521 CCTGTAGTCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAT GGCGTGAACC CGGGAGGCGG AGCTTGCAGG GAGCCGAGAT 001600
001601 CGCGCCACTG CACTCCAGCC TGGACGACAG AACCAGACTC CATCTCAAAA AAAAAAAAAA AAAATGGATG TCTATACAGG 001680
001681 TTCACTTTCT CAGTAGGAGC CAGGAGTCTG GTGGGCAAAA ATGCCACTGC ATGTCCAAGA TACTGACTGG TGGCACCAGC 001760
001761 GCAGCCCCGC TCCCCGTGGT TAGCTTTTAC CAACAGCAGA TAGGCCTGGA GTTCCTGTAT CTCGCAATTG CACCTTAAAG 001840
001841 ATTTTTTTTT TTAATACAGA TAGGAGATGA AGATTTAAAA AAAAAAATAA GTGTAGCAGG AATCCAACAG GAATATGTCT 001920
001921 CTTCAAAAAA GGTTGAAGCA AAACAAAAAA AAATCAATCT CTATTTTTTC ATCACTTCCA CCCACTTCTC AAAATAAAAT 002000
002001 AGGTAAAAAC AGTAAGGACT TAATTATAAC ACAGCCTCCA ATGATATGTG CATTGAACTC TCGTTCCAGC AAAATTTAAA 002080
002081 CAAAACTGTT TGGTTTGCGT CTCCCTAAGT TGTTCCTTGA TAAGCCAAAA ACAAGAAGTT GCTAAAATCA ATGAGCCAGC 002160
002161 CTATTTTCTC TTAGAAAATG CCACCAAAAA AGTTTAATTT CCTTTTTATT CATTGGAATT TGTAGAAAAC TTCTAAAAAA 002240
002241 TAAAATTTAA AATAATTTCT CTTTTACCTG AAGTTATTTC CTGTGTATGT TTTTGTATTT TTGGTCTATT ACAAGATTGT 002320
002321 TTTAAATCAT ATGGAAGACA AGATTTTGGT CTATTTTATA TGCTTTGGAG ATGTGGCATG CTGGTTGGGA CAATGGTAAT 002400
002401 AGTTTCAAGT CAGTGATATT CTATAAAGTA ACTGACGGAA GAAATTATCT TGGCGAGAAG ACATATTTGT TCACATTAAT 002480
002481 GGAATACCTG CAATTTCATT TTGCCTTAAG AAATCATGGT TGGTGAACTG AGCCACAAGA CTTTTTAAAT GTTATACTAC 002560
002561 CACTACTACT ACTAATGATA AAGCATGAGC TTTTAAAAGG CATGAAATAC AAGTTGTTCA CTGTTTTGGG ATAGTCCACA 002640
002641 CAAGCAGATG GAGTCTACAA TGGCTTGGTA GCTCCCTGAA CACTGTTAAA CACTGGGGGC TGAGGAGAGC AATGAGATCT 002720
002721 GAAGTACAGC CCAGGCTCGG CACCGTTTGT CAAGAAGTTC CCCAAGGTGT CTTTCTGAAA GGGGCACCAA GGCCTGTGTG 002800
002801 CACGAGCAGA GGCCTAGTGA GCAGCTGCTC CTTGTAGGTC TGTGCCTGCA AGTGAAATTC CCGCGGCCTG GAACACCCTG 002880
002881 TCTCCTCATC TGTCTGGGAA TGCTGACCTC TCTCTAGGTC CCGGACCAGG GTCCCAAGTC TAGCCACTGG AATGAATTCC 002960
002961 AATGCACACA GTATGGTGGC TTCACCGGGA TCGGGCCTGC CCTTTGGCCC GCTTCCCAAC TAAGCTGAGC CTCCCACTTC 003040
003041 ACCCAAGTGG GCGCACGAGT GTACCCGTGG ACACACACAG AGGCACACGT GCACACACAC ACACACAGAA ACTTATTTTG 003120
003121 GCTTTTGCCA AAATACCTTC AGAATTTTTA GGAAAAATTA AATGATGCCT ATGGCTAGAA TTCCTATCTG AACGTTCTTC 003200
003201 TGCGGGATTA GATGTAAGGG GGTAAATACA CTTTAATGTG TTTGACTCAA ATTTCCATTC TAAAAATAAC ATCTCAAATA 003280
003281 GGTCTTTCAG GGCCACTCAG CTTATTTTAC TTCTTTAGAA ACAGTCCGCT GTGTTAGAGT GGTCTCAAAA AAGTCCTATT 003360
003361 TTTAGTCATG TGAAAGAAGA CAAGGACGTG CTAAAAATGT AAAAGGAGAA ACTTGACTGT TGGCTACTGG TGGGTCACTT 003440
003441 GGAGAAACAT GACTGTTGGC TACTGGTGGG TCACTTGGAG AAACTTGACT GTTGGCTACT GGTGGGTCAC TTGGAGAAAC 003520
003521 ATGACTGTTG GCTACTGGTG GGTCACTTGG AGAAACTTGA CTGTTGGCTA CTGGTGGATC ACTTGGAGAA ACTTGACTGT 003600
003601 TGGCTACTGG TGGGTCACTT TAAACACCGG CCCGGGTCCC CTGGTGCTTG TTTTGTTCCC GGCAGGAATC TAGGGATCAG 003680
003681 TCAGGGCCTC TCCTTTTACT AGAGCAAGAG CCAAGAATCT GCTCTTTTCT TCTCCATCAG ACTATCTGTG GCCTTTGACC 003760
003761 TATCAATTTC TAGGCATTTC CTCTAAAGTT CATATTGTAC CAGACTCCAG TCTGGGAATG AGAAGAGAAA GGATATACAA 003840
003841 CTCCAGATTT ATTTGTTATT ACTGAATAGT TTACTGGTTT CAACAGAGGG ATAGGGCTTT GTTTAAATTT CCACTGAGCA 003920
003921 TAATTAATGG TTATTGACTG GTAAATGAAG AACAGGTGAC ACTCTGGATT AGAAGATAAA TGATCCTGTG TTCTGGTGTG 004000
004001 ATAATGGGTT AGTAATTCAC CACAAAGCCG AGGCTGAGTG CATCCCGTCG TAATGCTAGA TCATGTCCAG GAGACAAAGG 004080
004081 CCCCTGTGTG AGAAGGACGC AGCCATCCGC CTCCTTATAC AGCTGCACAC GTTGATGTGC TCCATTGATT CCCTGATGGA 004160
004161 TGGCACAACT GAGGCAAAAG TTCACCCGTT CTCACCTTCC TGTTCACATG CTGGACCACA TGACCCATGA CATGGCCAGG 004240
004241 CCACACTCTG TGATCAAATC GCCACCCAGC TTTGGCTTCT GACTAGAGAA ACAGTGTTGA GGTTACATGT TTTAGAGGTC 004320
004321 AGTCTTCTCT CTTTGTCTCT CAAGGAATGA AGGAGGAAAA AGACAGTCTT CCTGCATTCT TTTGGTGTCC TTTGAGGATG 004400
004401 TGACTGACTT GTCCACTTCC TCAAATACTT ATTTACTTTC AGTCCTGACC TGATTACCAG TGCACATGAA AAAAATCTCC 004480
004481 TGTTTTTTAA TCCATCTCAC AGAGAGGAAA GCAAATCAGT TAAGGAATGT GCCAGGGCTT CAGATTCTTT AACATAAAAA 004560
004561 TGTCCCTTAA TTGCCAAAAA AACAGGGCAG TTTTCAAATC ATGTCTTGCA TTCATTTTGC TT
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Predicted Small Protein

Name NONHSAT106545_smProtein_1667:1837
Length 57
Molecular weight 6070.0046
Aromaticity 0.0892857142857
Instability index 85.3180357143
Isoelectric point 7.83612060547
Runs 10
Runs residual 0.0252732240437
Runs probability 0.03705175764
Amino acid sequence MSIQVHFLSRSQESGGQKCHCMSKILTGGTSAAPLPVVSFYQQQIGLEFLYLAIAP
Secondary structure LEEEEEEELLLLLLLLEEEEEELEELLLLLLLLLLLLEEHHHHHHHHHHHHHHLLL
PRMN -
PiMo -