NONHSAT106665

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT106665

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5661 nt

Genomic location

chr6+:2403917..2409577

Exon number

1

Exons

2403917..2409577

Genome context

Sequence
000001 TTTGCTTGTG TCTTCTTGCT TATGCCTGGA TGTGAGGTCA GGTGGGGTAG GTGTGCATAA GGCCTGCCAC CTGGTGTTGG 000080
000081 TGTGTACACA GGGCTGGCAT CAGGCCACAG AGCTCCTAAG GAAGCAAGTG CAAATGGTCC CAAAGGCAGT AAATGGAACA 000160
000161 TGCGAGTAAA CCTTAACACT TTTTTTCACA TTCCTTGCCA CATCAGCAAG GCCAAAAATG GGAGAATTGC ATTTCTTTGA 000240
000241 CAAATATTTC TTTTTTATTC ATTTTCTTAT AAAATTATCC CCAACCTGTC TGAAGAGTCT GCCAGCCATT CATGTATCTA 000320
000321 TACGAGGCAG TTTTATGGGG ATGGCATAAG CAAATTCCCC ACTAAGACTT TCAGCTCTCT GTGAAAAATG AGTTGCCGCT 000400
000401 TAATGAAGCA CAGCTGAGAA CCTCCAGCTG CCTTCCAGTG ACTCCCCAAT TTTATATCTC GACACCAGAC TTCTCCTCTG 000480
000481 CAGTCCAAAG AGTGGTGTGC TGGTCAATGT TTAACAACCA ATTCTCCAAA GGGGAAGAAA TAATACACCA TGAATTGTCG 000560
000561 CATTTGCCAA TTTCCAGGTG CATATATTCT CACTGTGGCT GACATCAAGC TACTGACATG ATATGACTGA ACACAGAATT 000640
000641 GGAAGAGATG CAAACTAGTG TGAGTGGGTC TAATGCACCA TCGGATCTTT TATCTGTCCA CCTGGAGGGA AAATAAGCAC 000720
000721 CTCAAAATCA GTATGTGCAA AGCTGAACTA ATCTCTCTCT GCCCCACATT CAAATTTGTC CTCTTCTGGG GTTTTCTATC 000800
000801 TGAGTGAATG GCACCACAAT GAAACTGGTT TTGCAAGCCA GGCCCCAGAC ATCAGTTGTA GTCCTCACCA CCATACCCAA 000880
000881 ACCATCACTA AGGCCTATTG ATTTTACTTC CTAACTATCC ACAATCTGCC CACTTCCCCC TACACTATGC TCTCATTCTT 000960
000961 CATCACCTGG ATTATTGCAA AAGGCTCCTG GGTGATTTCC CTGTGTCCAT TATTACACAC ACATGCACCC AACCCGTTTT 001040
001041 CCTTATTAGC CAGAGTGATC TTTGAAGAAT GCAAATATGA TAACGCCACT ACCTTGCTCG TTAAACCCTT GAATAGCTTC 001120
001121 CCATAGGTCT TAGGATGATA GTCAAAATCC TCAGAATAAC CTGAAAAACG TGAATAATGC CTCTGCCACT TTAACCTAAT 001200
001201 CCTGGGCTGT TCTGTACACA CACCCCTTGC TCCTCTGTCC TGCAACACTG GCTGTTTTTC TGTTCTTTAG ACATGCCAAG 001280
001281 CCCTCTACCA TTCAGGCTTT TCCACAAATT TTTCTCTTTG TTCGAGATGG AGTCTCACTC TGTTGCCCAG GCCGGGGTGC 001360
001361 AGTGGCGTGA TCTCGGCTCA CTGCAACCTC TGCTTCCTGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCCC GAGTAGCTGG 001440
001441 GATTACAGGT GCCCACGACC ATGCCTGGCT AATTTTTGTA TTTTTAGTAA AAACGGGGTT GCACTATGTT GGCCAGCCTA 001520
001521 GTCTTGAACG CCTGACCTCG GGTGATCCAC CCACCTCGGC CTCCCAAACT GCTGGGATTA CAGGCTTGAG ACCCCACGCC 001600
001601 CAACTGTCCA CAAATTTTTC TATGCTGGAA AAGCTTGATC TAATGAACTC CTTCTTATTC TTCAATCTCA GCTAAAATTT 001680
001681 TCTTAGAAAG GCGATCCCAA TGGAAGCGAT CACTCTATTC TTATCTTCCA TAACAACCTG TTCTTGGCTT CCACTGCCAA 001760
001761 CAGCAGTGTA TGGAAGTCCC AGTTGCTTCA CGTCCCAACC AACATTTGGT TTATCAAACT TCAGAGTTTC TGACATCCTA 001840
001841 ATGTAATGGT ATCTTATTAT GATTTTCGTT TGCATCTCTT GGATTACTAA TAAATTTGAG CATCTAAAAA TAAGTTTATC 001920
001921 GGCCATTTGA ATTTCCTTTT GCATGAAATG CCTGTTTGAG TTGGTTGCCA TTTTTCTGTT GAGTTGTCAT ATTCTTATTC 002000
002001 ATTATTAGAA AGATCCCTTG TATTAGTCCG TTTTCACACT GCTGATAAAG AAATACCTGA GACTGGCCAG TTTACAAGGG 002080
002081 AAAGAGGTTT AATGGAGAAC TCACAGTTCC ACATGCCTGG GGGAGCCTCA CAATCTTGGC AGAAGGTGAA TGGCACAGCT 002160
002161 CACATGGTGG CAGACAAGAG AAGAGGGCTT GTGCAGGAAA ACTCCCCTTT ATGATAACCA TCAGATCTCA TGAGACTTAC 002240
002241 TCACTATCAC AAGAACAGCA CGGGAAAGAC CTGCCCCCCA TGATTCAATT ACCTTTCACT GAGTCCCTCC CACACATGTG 002320
002321 GGAATTCAAG ACAAGATTTG GGTGGGACAC AGCCAAACCA TATCATCCCT GTACATATCA TTGATATTAG ACTTTGTGGG 002400
002401 TTATATGTAT TACAAGTATC TTCTTTCACT CTTTGCCTTG TTTTCTTATT TTCTCCAGTA TGTTTTTTGG TGAAAGTATG 002480
002481 TTTTTAATTT TAGGATTGCC AAATACCTTA CAAGCAGAAA TTACAAGAAT TTCTGCTTAT AAGAGTCCGT TGGGGGAAGC 002560
002561 TCTCTCAGGT TTTGTTTGTC TGAAAAGGTT ATTATTTATT CTTCGTTCTT GAAAAAATAA TTTGACTCGG TATGGAGTTC 002640
002641 CAGGATGACA GTAACTGAAA AAATTTCGCA AACTGAAAAA AAAATTCTAC TCTCTTTTGG CTTTGATTAT TGTTGATAAG 002720
002721 AAATAACCTT TAATGTAACT CCTTCCCTTT GAAGGTTGTT GTCTTTTCTC TCTGGCTTGC ATTGAAAACC TGCTTGTCTT 002800
002801 TGATGTTCTT TGGTTGTTGT TGTTGTTTTT AATAATGCAT CTACCTTTGG ATTTATTTTA TTTAACCCAC AGGGAATTTA 002880
002881 TTGGGCTTCC TGGCTCTGAC AGTTTGAGTC TTTCAACAAA TCTGGAAATC TCTCAGTCAT TATTTTATTG AATATCACCT 002960
002961 CTTCTTCATT CTCTCTCATG TCTTCTACTG AACTCTAAAC ATATATTACA TCTTCTTATT CTCTCTTCCA TCTCTTTGTT 003040
003041 TCTCTGGGCT GCATTTTGGA TTTCTTCATG CCTATTTTCT AGTTTAGTAA TTGTTTCTTT GGTTGTGCTT AATCTGCTGT 003120
003121 TTAACACGTC TAATAAACTT TTAAATCTGA ATATTATAAT TTTCATTTCT AGAAGTTCTA CTTTACAAAT TTGGTTCTCC 003200
003201 TTACAAATGT GCTCATTTAT TTTCAAAACT CTAAAGGAAA TAAAAATATT TATTAAAATA CTTGGCCAGG CACAGTGGCT 003280
003281 CACATCTGTA ATCCCAGAAC TTTGGAAGGC CAAGGCAGGA GGACAGCTTG AGGTCAGGAG TTTGAGATAA GCCTGGGTAA 003360
003361 TGTAGTGAGA CCCCCAACTC TACTATATAT ATATATGCCA GGCATGGCGG GTGTGCACCT GTAGTCCTAG TCTCGGGAGA 003440
003441 CTAAGGTGGG AGGATTGCTA GAGCCTGGGA GCTTGAGACT GCAGTGAGCT GGAATTGTGC CATTGCATTC CAGCCTGAGT 003520
003521 GACAGCGATA CCCTGTCTTC AAAAATAAAT AAAATACTTA TTTTATATTC TATTTGATAG GTTCCATATC GAAAATCTTG 003600
003601 GTCTCTCTGA CATCTAATCT AACTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTGACA 003680
003681 CAGAGATGTG CCACCTATAT TCCACATCAA GGAAAGAGTT GACGCCCAGA TGTCTATGCC CAGCTGTGGG GAGAAATGAG 003760
003761 CTCAGCAGGC AGCCTCCATC TGCAGGGAGC TGCCTTGCCT ACGGCCATGC CCTATTCAAA ATAGCCTGCA TCTGAGGACA 003840
003841 GAGTGAGGGT ATCAAGACCT GGCCATTTTG TGAGGGTATC AAGACCTGGC ACCTCTCATG GATGATATTT TCACACACTG 003920
003921 GGTTGAACAA GGGTTTGTTA GAGCTACATT ACAGTTCAAC TTCTCCTTCT CCTCCCTTTC ACAGTTGCTG ACCCTAATAA 004000
004001 ACACTGTATT CCAAGGTCTG ACCCTGTGGC TGCTTCCAAA GCACCCAATC TGCAACATGT GTGGGTGTGT CTGCATGTTC 004080
004081 TGCTGCTACT TGCTCATGTT CCTGGCTCTT GTTCCTTGTT TCCTTCTGTA TTTCTGTTTC TTGAGACTTT ATCTGTTGAA 004160
004161 ATTCTTTGAG ATTGAGTTGA GGTTGGGTTC CTTTTGAGAG TACAGATGGT CCCTGACTTA TGATGGTTTG ACTTCACAAT 004240
004241 TTTTTGACTT TACTATGGTG CAAAAGTGAT ATGCATTCAC GGAAAACTGC ATGATCCTCT TTTGAGATGC TAGGCAGTCA 004320
004321 GCCAGGGGAT CATGATCGTA AGGGCAAACA ACTGATAAGT GACAGTGAGC TGTGTTGTCT GTTGCCCAGC TGCAGGCTAA 004400
004401 TGTAAATTCT GAGCACAACG AAGGTGACTA GGCCAAGCTC TGATGTTTGG TAGGCTAGTC ATATTAAATG CATTTTAGAC 004480
004481 CTATGATATT TTCAACTTAC AATGAGTTTA TCAGGAGGTA ACCTCATGGT AAGTCGAGGA GCACCTGTAT ATGACATTTC 004560
004561 TTCTAGAAGT CACCTGGGGC ATGACCAGCT TGAGACCAAT TTGTCTGTTT TTTCAAAACA CAGACATAGT GTGTATTGGC 004640
004641 TGAAAACCCA TATGAGTGGG GATTGTAGTT AAGACTTCTC AAGATAGGCA TGTTCTTTCT TTCCCCTTCT TTGCTAGTCT 004720
004721 GTTTCCTACT TACCCTTATA CTAAGGCTAT AGATGTTCTA GGCTTCACTT GGTGGGGCAG TCTCTCCACC TTGGGTGGGC 004800
004801 TTAATTTTCT GTTTCTCATG CCCCTGTAGC TCTCAAATGG AAACGAAAGG TCATCAGAGT TCAGTACTTA GTTTTGGGTG 004880
004881 GAGGCTGCTT TGGATCTTCC TTACTTTCCG TAGTTCCCAG GCTCAGTATC TTACTTTGAA ACTGGAAACT CCTGCTTCCA 004960
004961 AGTTTCAGAG TAAGATAGAT GCCTCACTTT ATTGCTGGCA TGTTGATTCA CTAAAATGTT ATTTTCTTTT GTTTCATATT 005040
005041 TATCCAGTTT CATTTATTTT CCTTTTCTGA AATTGGGGCT GGGTCATTTA GGGTTTCTAG TCCACCAGAC TTGGAAATAA 005120
005121 ATGTCTGGAG TCACGTTTAA GTGGACTTTA CCTAAAAGGG CCACCTGGAG AGCCAGAGAC CCGACCGGGG AGAGAGTTTG 005200
005201 TGTTGATTGG ACCATCAGAA ACAGAGTTAA TAGGGAGTTG TAAGTGGCTA AACATGGGAA GCAGGGAGCT TTTTGAGAGA 005280
005281 TCCACAGTTA TGCAGAACGT CTCTTAAATG TACTCCAGGA AAAATAGTCA GTTTTGGGGG TCCCCAAGAC AAGGGAGCAC 005360
005361 TATTAGAAGG TGGAGGCACT GTCTGCCAAA TCAGAGCTTC CCTGGCCTTG GCTTTCTCCC AGGAGGAGCC AGAGGAGGAT 005440
005441 TTGTGAGGAG GGGACAGTAC AGAAGCATGA AGCTTAGAAA GACAAGAGAC CCCTGCCCAC TCCAAGGCCT CCAAGGCAAA 005520
005521 GCCGAGAGTG GGGAGAAGCT TTAAGTAAAG TTCAGAATTT TGATTAAGAC AGAGGAACAA GTACACCAAT GGCAAAAAGA 005600
005601 AGACCACTCT TGTATATTCT TACAACTATG GTTGTACCCA ATCTCCCTTC CAGAGGAGGG C
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Predicted Small Protein

Name NONHSAT106665_smProtein_2210:2383
Length 58
Molecular weight 6846.7177
Aromaticity 0.140350877193
Instability index 50.4807017544
Isoelectric point 6.48382568359
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0366837425661
Amino acid sequence MITIRSHETYSLSQEQHGKDLPPMIQLPFTESLPHMWEFKTRFGWDTAKPYHPCTYH
Secondary structure LEEEEELLEEELLHHHLLLLLLLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLLLLL
PRMN -
PiMo -