NONHSAT106680
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106680 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1719 nt |
Genomic location |
chr6+:2462677..2468881 |
Exon number |
2 |
Exons |
2462677..2462799,2467286..2468881 |
Genome context |
|
Sequence |
000001 GACCCTGAAG AGTCCTGGTC CAGCCCCCAC ATGCACTTGA GCAAAGGCAC TCACAGTCTC TGAGCCTCAC CGATGGCCTG 000080
000081 GAAACTCAGG CTTCTGCCCG CCTGTGATGC GAAGTCCTCC TCTGAGTGGG GAGGAGCAGT CTCTCCAGGG TCAGCCTAGA 000160 000161 CCCTGGATGT GGAAGCACCA AAGTATAGAA AATAAAGGCA CGGTTCATAC GGCATGCAGC TGGCTCACGG ATGGTGTGCC 000240 000241 TGAGTGTGCA AAACGATCTC GTGTCAAGTG AGGTGGCTCA GGCTGCTGTC CTTGTCGCTG CAAGCCCTGC TTGGAGAATG 000320 000321 AAAGCTCACT TGTTGTCAGG GTCCTCCATG CATCCCAGCA CCCCTGGGTG GGACCAAGGG CATGCTCCAC CTTCTATCAC 000400 000401 GAGGAACAAT TAGTATTAAC AAGACGGCGC CGCGGAATGC ACTTCCTAAA TTGTGGACAG TGTTAGCAAA TTCCTAAAAG 000480 000481 CACCCAACAC CTCTTCAAGG AGGAAGGTGA AGCCTTGTTG TTTAGAGTTC ACTTTTTCTT TGTAACATAT TCTATTTCCG 000560 000561 AGATCTTTCT TATACATTTT ATTTAGCCAA GGCTGTTTGC CAAGGAGTTT GCATCCACCC CACTGCTATT TGAGGCCATG 000640 000641 CTTGCTGTGA GTTTCTCCGA TTCCTCTCCC TGCTTCACCC ACTCCTTCTG AAAAACACAG CTAATTGATG GTCAATTTGG 000720 000721 CCACAGAAGC CTAGTATTGG AATTGTTGGA ATACAGGAGG ATTTGTGGAC TAGATTTTTT TTTCTTCTTC AAGAATGACA 000800 000801 AGCTAACCCC AAATTATGGC AAGAATTCTT CAGGTTCAAT AATTAAAAGC AAAAGGCAGT CCCCACGGAG AAAAAACAGT 000880 000881 GTGGTCTGGA AGATATCTTT CAAATTGAAG CAGACTGTGT AACTCCCAAA TATTATGGAT ACAAATTAGC TATATTTGAT 000960 000961 CACTGGATCT TATTTACCCT AATTGTCTTC ATTTCTGTGG TTTCCTCATA CATTGTGTTT ACAGCACACT TGGTTTCCCA 001040 001041 GCTCAGTGTC GGAGTCTGGG CTGCAGGGAT GGTGAGATCG AGCTTCAGAG TTGAGAAGAG GGGAGGGTAG ACAGAGAGAG 001120 001121 AAAGGGGAGA GAGAGAGTGT GGGAGTCTGG GCTGCAGGGG TGGTGAGATC GAGCTTCAGA GTTGAGGAGA GGGGAGGGTA 001200 001201 GACAGGGAGA GGAAGGGGAG AGAGAGAGAG TCGGAGTCTG GGCTGCAGGG GTGGTGAGAT CCAGCTTCAG AGTTGAGGAG 001280 001281 AGGGGAGGGT AGACAGAGAG AGGAAGGGGA GAGAGAGAGA CAGAGAGAGG AGAATGGGAG ACAGAGAGGG AAGGGAGGGA 001360 001361 GGGAAGGGAG AGTATAAGAG AGAAACAGAG ACACAGAGGA AGGGAATGAG AAAGGGAAGA CAGAGACATA AGGACAGTGA 001440 001441 GACACAGAGA AAGGGAGGGA GAAAGAGAGG GAGCGAGAGA GGGAGAGAGG GAGAGAGGGA GAGAGAGGGA GAGAGAGAGA 001520 001521 GGGAGTGAGA GAGGGAGAGA GAGAGGGAGC CAGAGACAGA GAGAGGGAGA GAGGGAGAAA GGGAGAGAGA GAGAGGGAGA 001600 001601 GAGAGAGGGA GCAAGGTGGG GGCGAGAGAG GGAGTGAGAG AGAGGGAGTG AGAGAGGGAG AGGGAGAGAG AGAGGGAGCG 001680 001681 AGAGAGAGCC AGGGGGGCCT TTTTTGGGAG ATATGCTTT |
Predicted Small Protein
Name | NONHSAT106680_smProtein_230:412 |
Length | 61 |
Molecular weight | 6310.1 |
Aromaticity | 0.0333333333333 |
Instability index | 57.8116666667 |
Isoelectric point | 6.80670166016 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.0489565195449 |
Amino acid sequence | MVCLSVQNDLVSSEVAQAAVLVAASPAWRMKAHLLSGSSMHPSTPGWDQGHAPPSITRNN |
Secondary structure | LEEEEELLLLLHHHHHHHHHHHHLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |