NONHSAT106722
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106722 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1719 nt |
Genomic location |
chr6+:2680310..2686514 |
Exon number |
2 |
Exons |
2680310..2680432,2684919..2686514 |
Genome context |
|
Sequence |
000001 AAGTTAAGGC CAAACATAAT TTTTGTTAAA TTAATTATAA ATGAGATCAT GAAACCAAAG AGCAGATCAG ATATATGTTT 000080
000081 GCAAAGGAAG GGCAACCATC ATGTCCCCCA GCTCCATTCG TACTACAGTT TATCAGGTAT TGTAAGTAGT CTAGAGATTA 000160 000161 TTTAAAGTAC TCGGGGGGAT AGGCATAAGT TATATGCAAA AGACTATGCC ATTTTATGTC AGGAACTTGA GTGTCCTCCG 000240 000241 GTTTTGGTAT TTGCAGGGAT CCTGGGACCA ATCCCTCTCC GATACCAAGT AATGACTGTA CTCGGTTTCT AACTAACCAG 000320 000321 TCCTTATGTT TTTATAAAGG TGAGTTTAAA TGGAAGCTTC TTAGCCCTAA TCATCACCAG TTGTTGACAT GACCTTTGTA 000400 000401 TTAGTGAATA TGTTGAAAGT AAGATGTAGC TCAAAAACCA CTTTCCTCCA GGTTGCCCTG GCTAATATTT AAGCTTGATT 000480 000481 TTTGACAAAC AGCGTAGATA CAAAGCTAGA TCTACTTGGT CCCACTACTT CTTAGCAATA AAATCCCATA TGGAGATTTG 000560 000561 TAACCCCAAG TGTTTCCCTT CTAGAACTGA TGTGATTGTG TGATCCGCGC GAATCAGAGT CTGCGGGGGC GAGCTTGGTT 000640 000641 CTGGTCCCGC TACAGCAGGA CGGAGCTACT GAGGCACGGT CACGGTCATG AGTGCCCTTG GGGAGGTCAG GGAGGGGGCG 000720 000721 GAGGGGATAC GTACTACTCC ATGACCAGGA CAATGTCGTT CTTAGACTCG AAGGCATCGT ACAGCTGGAT GAGGTTCGCG 000800 000801 TGGTCCAGCT GGTTCATGAC GCTGATCTCG TTCTTCACCT CCTCCTGAGA AGCAGGAAAC AGTGCATTAG TGTGGTCAAG 000880 000881 ATGGGGCGGG GAGGGAGGGG ACCACCTCCC ACAGGCTGTA CCTTGTCCTT CATGCCTCTG GTCTTGATGA TTTTGGCTGC 000960 000961 CAGCTTCAGA CCTGTGGCCG TCTCCTCACA CTTGTGAACC TGGCCGAAAC GCCCTCTGCC AAAAAGAGGA AGCGGCGTAG 001040 001041 CATGAGGCCC TGTGGTCAGC TGCCGAGTGG ACAGCGCACA GTGGCCCCAG TATTTCTCCT GCTGAGTCTG GATGAGCAGC 001120 001121 CCTCTGAGGA GTTCTTTCAG TAAACTTCTA GAGCAGTATT TGTCAACATG TGGTGTGTGG ATCACTTGCA TCAGAATCAC 001200 001201 CTGGGAGCTG TTAAGAAAGC AGGTCTCGGC CGGGCACGGT GGCTCACACC TGTAATCCCA GCACTTTGGG AGGCCGAGGC 001280 001281 GGGAGGATCA CGAGGTCAGG ACCAGTCTGG CCAACATAGT GAAACCCCAT CTCTGCTAAA AATACAAATA CAAAAAATTA 001360 001361 GCCAGATGTG ATGGCATGTG TCTGTAGTCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAC GGCGTGAACC CAGGAGGCGG 001440 001441 AGGTTGCAGT GGGCCGAGAT CGCGCCATTG CACTCCAGCC TGGGCGACAG TGCAAGAATC CATCTCAAAA AAAAAAAAAA 001520 001521 AGAAGAAAGA AAGAAAGAAA AAAAAAAAGA ATCCAGGATT CTGGGCCCTA CCCCAGACCT CCTGAGGCAG GAATCCAGGG 001600 001601 GTAGGCCCCA GAATCTGCAT TTCAGCACAT TTCTTGGGTG ATTCATATGC ACCCTCACAT TTGAGAACCA CCTTTACAGA 001680 001681 CAATGCAGAA TCCTTCTGAA TACATATGAA TGTTATGAG |
Predicted Small Protein
Name | NONHSAT106722_smProtein_740:847 |
Length | 36 |
Molecular weight | 4225.8422 |
Aromaticity | 0.257142857143 |
Instability index | 41.7428571429 |
Isoelectric point | 9.98431396484 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0268150503445 |
Amino acid sequence | MTRTMSFLDSKASYSWMRFAWSSWFMTLISFFTSS |
Secondary structure | LLEEEELLLLLHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i?????????????????????????????????? |