NONHSAT106875
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT106875 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
648 nt |
Genomic location |
chr6+:2933659..2936387 |
Exon number |
3 |
Exons |
2933659..2933795,2934680..2934798,2935996..2936387 |
Genome context |
|
Sequence |
000001 CATGTAAAAA CTATAAGATG CTAATCTATA AGGAAATACT AGCACCTCCT TCAAAAGTTA GAACTTATTT TAAGAAAATT 000080
000081 CTGGCCGGGC ACGGTGGCTC ACCCCTGTAA TCCCAGCACC TTGGGAGGCC GAGGCAGGAT GGCAGTGCCT GCTTTTCATC 000160 000161 TTTGCTGCCC ATGAGCAATT GAAATGTAGT TGTGTGTGCT CTTTTGGAGA ACGATTTTAA ATCAGCCGAA ATGCTCTGTA 000240 000241 ATGTTACTAA CCTTCTCTGG CTGAGGCCGG AGCCAGCTCC CTCGGCTTGC GGGGAGGTGT GGAGGGAGAG GCACGGGTGG 000320 000321 GAACCGGGGC TGCGCACAGC GCTTGCGGGC CAGCTAGAGT TCCGGGTGGG CGTGGGGTTG GCGGGCCCGC ACTCGGAGCC 000400 000401 GCCGGCCGGC CCTACCTGCC CCAGGTAGTG AGGGGCTTAG CACCCAGGCC AACAGCTGCG GAGGGTGTGC TGGGTTCCCC 000480 000481 AGCACTGCTG GCCCACCGGC GCTGTGCTCG ATTTCTCACC GGGCCTTAGC TACCTTCTTG CGGGGTAGGG CTTGGGACCT 000560 000561 GCAGCCCACC ATGCCTAAGT CTCCCCCGCG TTACCGCCGC CGCCGTGGGC TCCCGCGCAG CCTGAGCCTC CCCAACGAGC 000640 000641 ACCGCCCC |
Predicted Small Protein
Name | NONHSAT106875_smProtein_230:427 |
Length | 66 |
Molecular weight | 7043.0204 |
Aromaticity | 0.0615384615385 |
Instability index | 58.0569230769 |
Isoelectric point | 6.70440673828 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0475573612829 |
Amino acid sequence | MLCNVTNLLWLRPEPAPSACGEVWRERHGWEPGLRTALAGQLEFRVGVGLAGPHSEPPAG PTCPR |
Secondary structure | LEELLLLLLLLLLLLLLLLLLHHHHHLLLLLLHHHHHHHLLEEEEEEEELLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |