NONHSAT106911

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT106911

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4060 nt

Genomic location

chr6+:2993299..3018206

Exon number

29

Exons

2993299..2993413,2993805..2993964,2994514..2994637,2996232..2996312,2996463..2996525,2997259..2997380,2997494..2997654,2997901..2997936,2998592..2998674,3000742..3000787,3006656..3006794,3006922..3006984,3011524..3011652,3011907..3011979,3012125..3012234,3012456..3012536,3012784..3012871,3013145..3013334,3013449..3013575,3014049..3014198,3014547..3014621,3014831..3014974,3015177..3015314,3015471..3015544,3015779..3016527,3016774..3016914,3017423..3017518,3017625..3017714,3017795..3018206

Genome context

Sequence
000001 ACATCTTGTC TATCAATAAC ATGTTTAACT ATATATTATA TCAATATGCT CAAGAAATCA GGCCTTGGTA AAGATTTTTC 000080
000081 TTTTTTTTTT TTTTTTTTGG GACGGAGTCT CGCTCGATAA ATATAAATAA TAAGTCATAT TAAGACAAAA TTTATTTAAC 000160
000161 TGATAAAAGT AAAATTTGTT ATTCTCTCTA GCTGTATAGA TAAGACAGGA TCTCTATAGT GCATTATTTC AAGACTTACT 000240
000241 TAGTAGGAAA ACCAGTAGGT TTGATTTTTT TTTAACTCCT TCACCTTCCT CCATGAGTAG AGGCAGCCTG AGGCCCTCAC 000320
000321 CAGATGCAGA TGCCCAACCT TGAACTTTCC AACCATTCAG AGTCATTAGC CAAATAAACC TTTTATCTTT ATAAATTACC 000400
000401 TGATAACATC CAGAATATGT AAAGAACACC TACAACTCGG CCGGGTGCGG TGGCTCACGC CTGTAATCCC AGCACTTTGG 000480
000481 AATCACTTGA ACCCAGGAGG CGGAGGTTGC GGTGAGCCGA GATCTCGCCA TTGCACTCCA GCCTCAGCCT CCCGAGTAGC 000560
000561 TGGGACTACA GGTGCACACC ACCATGCCCA GCTAATTTTT GTGTTTTTAG TAGAGATGGG GTTTCCCCAC GTTGGCCAGG 000640
000641 CGGTATACAC ATTTTTCTAT TATTCTTATA TGAAATACAT GCAATAGACA AATTCATGGA GACAGAAAGT AGATTAGAGG 000720
000721 CTACCAGGAG TGGAAGGAGG GGAGAATGGG GATTTATTAT CCAATGAGTG CAGTGTTTCT ATTTGTTTTT GTTTTTGTTT 000800
000801 GAGACAGGGT CTCGCTCTGT CATCCAGTTT CTATTTGGGA TGATGAAAAC GTTTTGAAAA TAAGGCCAGT CCAGCTCCCA 000880
000881 ACCCCAAGCA GGGAGCAACT TGCTCAGTCC ACGTTGTGAT AGCTCCTCGC TGCCACAAGG TGGTGTAACC TATAATCTCT 000960
000961 CTGGGAAAAA AAAAAATCAG CTTTTTTTTT TCACCTATGC CTCTCCCCAC CCCCTCTGGG TTCGTTTTGT CTTCCAGATT 001040
001041 GCTGGACTCG CTGAAGAGAG ACTACGCAGG AAAGCCCCAG CCACCCATCA AATCAGAGAG AAGGAATCCA CCTTCTTACG 001120
001121 CTATGGCAGG GACTCTTAAT CAGAAATTGG ATACATTGTT GTAAAAAATC CAAGCCACGT GGAAGTGTAT AAAATCTTGG 001200
001201 AACTAGAAAT ACATTTGCTG AAAAATTCAT TAGAGGCTCT CAACAGCAGA ATGGATGAAG CAGAAGAAAA AATCAGTGAA 001280
001281 CTCAAAGGCA GGTGATTTGA AAATACACAG AGGAGAAAAA AGAACAAAAA GAGGATCCTA AAAGCAAATA ACATGTAACA 001360
001361 GAGCTCCAGT TCATCTGGCA ACAGACTTCT CAACATGCAC CACCACCAGA CCCACCTTAC AAGAAATGCT AAAGGGAATT 001440
001441 CAATAAGAAA GAAAAACACT AATGTGCAAA AAGAAAACAT TTGAAGATGT AAAACCCACT GGTAAGCATT GAACAAGACA 001520
001521 TCCAGCCTCT CTTGGGTGTC AGTTTGCTCT CTGGTAAATT GGGAAATACA CCAGTCTCAC CAGTTGTTTC TAATCCTGAG 001600
001601 GTTTTCAATT ATGGAGTGGA AACCCACGAA GCCTACAAGC AAAGGTCTCT GGCTAGCGAC ATCACTGATG AGCACACTAC 001680
001681 TTTAAACACT GTACGTAGAT GTAACACTAC TTTTTTTTTT TTTTTTTTTT TTTTTTTGAG ACGGAGTCTC GCTCTGTCGC 001760
001761 CCAGGCTGGA GTGCAGTGGC GGGATCTCGG CTCACTGCAA GCTCCGCCTC CCGGGTTCAC GCCATTCTCC CGCCTCAGCC 001840
001841 TCCCGAGTAG CTGGGACTAC AGGCAAAGTG CTGGGATTAC AGGCGTGAGC CACCGCGCCC GGCCGATGTA ACACTACTTT 001920
001921 AAACACTTTA CCTAATTGGG TAAAGATATC CACGTAGCCA ATATCACTCA CTCCAAATCC CGACTGCCAT GTAGAAGGAA 002000
002001 AGGGGAATCT ATTATAAGGG CTCTGGTCAC TTGGGCCTCC TGGATCCCAA GGACAGAGCT GTAGCTGCTC TCGTCCACAG 002080
002081 ATTCCCATCT GCTCCTTTCT GCCTCTTGGC TCTGTTCTCT CTCACTGCTT GCCAGGGACT GCTTTGTCCT AATTACAGGT 002160
002161 GGGTGGACTC ATAGTCCTCA GGCCTAGGTG ACCATGTGGT TTACCATCTC CGTCTTTTCA TTTCACTCCA TTTCCCTACT 002240
002241 TTCCCTTTTT TTCTGATAGT TTGTCCAGAG GGTCTGCATT ATAAGTTATT CTTTTATTCA ACATTAATAA AAATTTCATT 002320
002321 CATCACTACT GCACTACTAA TATCAGAGCC CACCACTCAC AGCACAAGAG ACATTGGCTT CCACCTTTGG TAACAGATGA 002400
002401 TTGCCTATGT TTATTTCCCT TCCCAGGCGG TAACACTGGA TGTAATGTTA GGGCATCTAT GGGATAGGGA GATCTTAGCG 002480
002481 CTGGTCTAAG GAATACAAGT GTTACGCACA GCTCCTCGTC CCCTCCCTGC CTGCCCAGGG CCAGCATCAG GGGCTGTCAT 002560
002561 CACTGGGGGA TGTTCAGCGT GCCAGCCATC CTGAAGGGCT GGATGGATAG GGTGCTGTGC CAGGGCTTTG CCTTTGACAT 002640
002641 CCCAGGATTC TACGATTCCG GTTTGCTCCA GGTATGTGCT CTTGGATAAG GATCACTATG GATAGTTGGA GGGAGGGGAC 002720
002721 AGAGGATGCG TCTTCTATCA AGTTATATTT CTAGTTTCCT TCCTTTTCTT AGCAAATATC GATTGAGCAC CCACTATGTA 002800
002801 CAAAGCACCA TGTGCTGCAC ACGGGTGGAC ACAGCATCGT TTCTGAAATC ATGGAGCTTT TTGTCTGGTG GGGCTGCGAA 002880
002881 CACATCCACA GCATACTACA CGCATGGCAA ACAAGGGAGT GGGTCAGGTG TCAGGTGACG GGGGACCTGG GCAACCTTAT 002960
002961 GTGGGCAACC CGGTGGCCAG CCCTGGCTCC AGAGAGAGTA TCTCCCTGGT GCAGAGCCCA GCCCTGGCCT GGCACAAGTT 003040
003041 CACCCCCTTG AGCATCATGT GCCTGCTGTG AGAAAAGACC ATGCGACACC CACGTGGCAG GATGAGGAGG GCATGGAATC 003120
003121 TGGTAGATGT GCCACATGTG GTAGCTATGA ATTCTTACTA AAACAATGAT TTTTAAGGCT GGGTGCAGTG GCTCACGCCT 003200
003201 GTAATCCCAG CAATTTGGGA GGCCGAGGAG GGTGGATCAC TTGAGGCCAG GAGTTCAAGA CCAGCCTGGC CGACATGGTG 003280
003281 AAACCCCATC TCTACTAAAA ATACAAAAAT TAGCCGGGCA TTGGTGCTAC CACTTACTGA GCAGCCCTGT GTGCTGGGAA 003360
003361 CCTTGTCCTG TGGTCAGTGC CTCGGCCGTA TCCATCACAC ATGGTGTCAT GGAAACCAGG TTTCCACCAG CAACCTGGGC 003440
003441 ATGTTAGAGC TTCTGTGTCT GCAAATGCTT TACTTGACAG ATTTGAAAAG CTTGACCAAT AGGGAAAACA TGCCCTAATT 003520
003521 ATAGCTTTTG ATATGGTTTG GGCAGAAGCT AAGCCAAAGC ACTGCCCTTG GACCCTGGCA AGTGGCACCC CAGGCCCTGC 003600
003601 ATTCTGATGG CCGCATGCTG GTCTCTGCTG GCCATGCCAA CCCCCACATC TTGGTGCCTG CGTGAGTGTC CCTGGGCCTG 003680
003681 AAATGTGGCC GAGTAGTGGC CACCTGCCAA AGGGAAGGTG GTGGGCAGAG CAGTTCCAAC GTGCTGGGGT GTCCCACGAA 003760
003761 GGAACCCCTG GTGAGGGGTG GCAGAGGGAG GGAGTGGGGA GCAGACTCCA GGTCAGGGGC TCCAGGGAAC CCAGAAACCT 003840
003841 AGGGGTCAAC TGTTCTTCCA GGTTGTTTAA GGGAGGTTTG TCGAGACAGG GGGAGAGCTC GTTCTTGAGG GGTAGGGAGT 003920
003921 TTGCTGGGAA AATGCACGCG TCACCCCTTT TCTGTGAACT CTCTCTAGGT GCACGTGCCT TGCCCATGTC CTATTGGTTT 004000
004001 GGTATTTTTT AATTTTCTAT TTGTCAGTGC TCTTCATATA TCAGAGAAAT TAATCCTATT
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Predicted Small Protein

Name NONHSAT106911_smProtein_2903:3070
Length 56
Molecular weight 5608.3873
Aromaticity 0.0545454545455
Instability index 64.1309090909
Isoelectric point 7.95758056641
Runs 9
Runs residual 0.0121212121212
Runs probability 0.0463895267817
Amino acid sequence MANKGVGQVSGDGGPGQPYVGNPVASPGSRESISLVQSPALAWHKFTPLSIMCLL
Secondary structure LLLLLLEEELLLLLLLLLLLLLLLLLLLLLEEEEEEELLHHHHLLLLLLEEEEEL
PRMN -
PiMo -