NONHSAT107098
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107098 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1125 nt |
Genomic location |
chr6-:3381593..3383155 |
Exon number |
3 |
Exons |
3381593..3382449,3382556..3382626,3382959..3383155 |
Genome context |
|
Sequence |
000001 TCTGTAAACA ATGAGTGAGT TTACCATTCC ATCATTCCAT CAGTAATCAG CAGCAATGCC CTTCTTTGGC AAGAGCTCTT 000080
000081 TCCTCCCTAC ACCTTCCCTT GCTATAATAC TAGACTAGGA CTCAACAAAC TTTTTCTGTA ATGTCCCAGA TGGCAAATAT 000160 000161 TTTAGGCTTT GCAGGCCATA TGTTTTTTGC CACAGCTGCG TAAGTGCATC TTAAGGGTCA GTATGTTATG CATTGTAAAC 000240 000241 TACGTTACAA AGCCACAACT AAAAATACGC CTGGCTGGCT GTGCATACTG AGGACTAAGA GTTGGTGGCT CAACCCTGTC 000320 000321 ACTCTGTCAA GCATGCAGAA TAGATTCTCA TGGAGAAAAT ATTGACTTAT CTTTGTTGAA CTGAGAGAGC AGAGCAGCAT 000400 000401 CCTTGAAGAG CTCTAAGTAC AAGTGGAGGA TCCACCTCCA CTGAGTTATT CCCCTTATGT TAAAGTGGAC CCCCTTGTCA 000480 000481 TCGTGACATC AGGGTAAGTG AGGCGGAACA TTGCAGGGAA AGAGCATGGG CCTGGGGCAG ACAGATGGGA ATCTGGGTCA 000560 000561 CTCATAGTCT TCTCATTCTT TAAGCAGGGT GCATGCCTGT CTCACAAAAT CATTGTGAGG GGTGTGTCTT GCTCATGGTG 000640 000641 GCAGCAAATG AGTCTGAAAG GAGCGTGGCT GAGGGAGGCC AAGAGGATGC TGATAAGAAA AGGAACTAGG GACTTTACTG 000720 000721 TGCACTGCCA GGCATTGTTC TAGCTCTTTT CTCCTGATTC CATTCTCACC ATAAGCCTGT AAGAAATAAA TTCCACTACT 000800 000801 GTCCCCCTCG CACAGATGGT AAATGGAGCA GAGAGAAGGC AGGGCGCTGG GCCAGGCTTG CTTGGCTGGA AGGCTGTAGA 000880 000881 GCTGGGATTG GGAGCACAGC GTGTCTGGCT GGAGAGTCCC CACTCTTCTC TGCGACATGG TTTATCACAG TGGCTGTGCT 000960 000961 GATATTTTAA GCCTGGCTGT TGTTAATTTT TATTGGGGAC TGGTCCTGAA ACGCCTCACC ACTGAGGCTA CTCAGTCAGC 001040 001041 CCCATTCTGC TGTCCTGTAG TTAGTTGATC CTGCCCAACC TATGGCAGAA TAGACAAAAG GTGTCCTAGG GAAAGGTCCC 001120 001121 CAAAA |
Predicted Small Protein
Name | NONHSAT107098_smProtein_815:961 |
Length | 49 |
Molecular weight | 5209.9252 |
Aromaticity | 0.0625 |
Instability index | 52.06875 |
Isoelectric point | 9.48992919922 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0487924899689 |
Amino acid sequence | MVNGAERRQGAGPGLLGWKAVELGLGAQRVWLESPHSSLRHGLSQWLC |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHLLLLEEEEEELLLLHHHLLLLLLLL |
PRMN | - |
PiMo | - |