NONHSAT107102
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1057 nt |
Genomic location |
chr6-:3399752..3401315 |
Exon number |
3 |
Exons |
3399752..3400609,3400716..3400786,3401188..3401315 |
Genome context |
|
Sequence |
000001 GCATGAGCCA CCATGCCTGT CCCATTGCAG CCATTTTTAA GTGTGCACAA TTTAGTGATA TATTTCCATT GTTGTGCAAG 000080
000081 ACAATGTTTT TTAGAGTGTT AGATGTTCAT TATTATTGAG CAGAAAAATT GTCATCTGTA AAACCATGAA GTTCCAGGGA 000160 000161 AGTGTTGGTG GACATTTGCA TGTTTGTGAC GTGATGGCCT GTGAGGGAAT CTCTGGGCTC GCAGCAAGCT TGGGAACTTT 000240 000241 GGACTGTGGC TGTCTGGTAG CTTAGAATAG CAGAATAACT GGTGGGTGGG GGCAAGAATC TGCTTCATAA TTGTTTTTCC 000320 000321 AGTGGTCAGC TTAATAAATT ACCTCTCTTA TAGCATCCAT TCAGAGCTTT TAAAATTCAT TTTAAAATGC AATCATGGGC 000400 000401 GGGGCGCGGT GGCTCATGCC TGTAATCCCA GCACTTTGGG AGGCCGAGGC GGGTGGATCA CTTGAGGTCA GGAGTTCGAG 000480 000481 ACCAGCCTGA CCAACATGGT GAAACCCCAT CTCTATTAAA TGCAAAAAAT TAGCCAGGCA TGGTGGTGCA TGCCTGTAAT 000560 000561 CCCAGCTACT TGGAAGGCTG AGGCAGGAGA ATCGCTTGAA CCTGGGAGGC GGAGGTTGCA GTGAGCTGAG ATTGTGCCAT 000640 000641 TGCACTCCAG CCTGGGCAAC AAGAGCAAAA CTCCGTCTCA AAAAAATAAA TGCAATCATA TATTGCATTT TGAAAGTCTT 000720 000721 AACCACTTCA GGGGTAGGAG AGGACAATAA ACTCAAGAAA AAATTCTCCT GGACAGATCA TTCCTAGGGC TCTTCTATCG 000800 000801 ACTCCCTGAG TATCCATCAC TCACAGAATG CTTCATTAAT TGGTAAGAAA ACCCACTGAA GAAATAGAAT AGTGGTACTC 000880 000881 ATTTTCAAGA TTTATCTTAT CTGTATGCAA CCTCTCCCTT TCCCTTCCTT GTATTAATCC CTAAAAACGC CTGTAAACAT 000960 000961 TTTGTTCATA TTGTTAAATA TTAACTCAGG ACGTTGCTCA TTATCCGTAA CACAGCTATA GGCTTGGCCC TGTTGTTTGC 001040 001041 CATGTTCTGC CATAAAG |
Predicted Small Protein
Name | NONHSAT107102_smProtein_2:118 |
Length | 39 |
Molecular weight | 4465.3117 |
Aromaticity | 0.184210526316 |
Instability index | 51.8710526316 |
Isoelectric point | 7.77386474609 |
Runs | 9 |
Runs residual | 0.0642313019391 |
Runs probability | 0.0334452099158 |
Amino acid sequence | MSHHACPIAAIFKCAQFSDIFPLLCKTMFFRVLDVHYY |
Secondary structure | LLLLLLHHHHHHHHHHLLLHHHHHHHHHLEEEELLEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii |