NONHSAT107103
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107103 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1126 nt |
Genomic location |
chr6-:3399752..3401315 |
Exon number |
3 |
Exons |
3399752..3400609,3400716..3400786,3401119..3401315 |
Genome context |
|
Sequence |
000001 GCATGAGCCA CCATGCCTGT CCCATTGCAG CCATTTTTAA GTGTGCACAA TTTAGTGATA TATTTCCATT GTTGTGCAAG 000080
000081 ACAATGTTTT TTAGAGTGTT AGATGTTCAT TATTATTGAG CAGAAAAAAA TGGAATTGGA AGGCAAGTCG GTAATGCCTA 000160 000161 TTTTTGCTTA AAGTCACCTG AAACATGATA TTCCCGTTTG TCATCTGTAA AACCATGAAG TTCCAGGGAA GTGTTGGTGG 000240 000241 ACATTTGCAT GTTTGTGACG TGATGGCCTG TGAGGGAATC TCTGGGCTCG CAGCAAGCTT GGGAACTTTG GACTGTGGCT 000320 000321 GTCTGGTAGC TTAGAATAGC AGAATAACTG GTGGGTGGGG GCAAGAATCT GCTTCATAAT TGTTTTTCCA GTGGTCAGCT 000400 000401 TAATAAATTA CCTCTCTTAT AGCATCCATT CAGAGCTTTT AAAATTCATT TTAAAATGCA ATCATGGGCG GGGCGCGGTG 000480 000481 GCTCATGCCT GTAATCCCAG CACTTTGGGA GGCCGAGGCG GGTGGATCAC TTGAGGTCAG GAGTTCGAGA CCAGCCTGAC 000560 000561 CAACATGGTG AAACCCCATC TCTATTAAAT GCAAAAAATT AGCCAGGCAT GGTGGTGCAT GCCTGTAATC CCAGCTACTT 000640 000641 GGAAGGCTGA GGCAGGAGAA TCGCTTGAAC CTGGGAGGCG GAGGTTGCAG TGAGCTGAGA TTGTGCCATT GCACTCCAGC 000720 000721 CTGGGCAACA AGAGCAAAAC TCCGTCTCAA AAAAATAAAT GCAATCATAT ATTGCATTTT GAAAGTCTTA ACCACTTCAG 000800 000801 GGGTAGGAGA GGACAATAAA CTCAAGAAAA AATTCTCCTG GACAGATCAT TCCTAGGGCT CTTCTATCGA CTCCCTGAGT 000880 000881 ATCCATCACT CACAGAATGC TTCATTAATT GGTAAGAAAA CCCACTGAAG AAATAGAATA GTGGTACTCA TTTTCAAGAT 000960 000961 TTATCTTATC TGTATGCAAC CTCTCCCTTT CCCTTCCTTG TATTAATCCC TAAAAACGCC TGTAAACATT TTGTTCATAT 001040 001041 TGTTAAATAT TAACTCAGGA CGTTGCTCAT TATCCGTAAC ACAGCTATAG GCTTGGCCCT GTTGTTTGCC ATGTTCTGCC 001120 001121 ATAAAG |
Predicted Small Protein
Name | NONHSAT107103_smProtein_2:118 |
Length | 39 |
Molecular weight | 4465.3117 |
Aromaticity | 0.184210526316 |
Instability index | 51.8710526316 |
Isoelectric point | 7.77386474609 |
Runs | 9 |
Runs residual | 0.0642313019391 |
Runs probability | 0.0334452099158 |
Amino acid sequence | MSHHACPIAAIFKCAQFSDIFPLLCKTMFFRVLDVHYY |
Secondary structure | LLLLLLHHHHHHHHHHLLLHHHHHHHHHLEEEELLEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii |