NONHSAT107105
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107105 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
599 nt |
Genomic location |
chr6-:3399752..3401315 |
Exon number |
3 |
Exons |
3399752..3400122,3400687..3400786,3401188..3401315 |
Genome context |
|
Sequence |
000001 GCATGAGCCA CCATGCCTGT CCCATTGCAG CCATTTTTAA GTGTGCACAA TTTAGTGATA TATTTCCATT GTTGTGCAAG 000080
000081 ACAATGTTTT TTAGAGTGTT AGATGTTCAT TATTATTGAG CAGAAAAATT GTCATCTGTA AAACCATGAA GTTCCAGGGA 000160 000161 AGTGTTGGTG GACATTTGCA TGTTTGTGAC GTGATGGCCA CCATCCTACT GCAAGCACCA GAGCTGCCTA AATGCAATCA 000240 000241 TATATTGCAT TTTGAAAGTC TTAACCACTT CAGGGGTAGG AGAGGACAAT AAACTCAAGA AAAAATTCTC CTGGACAGAT 000320 000321 CATTCCTAGG GCTCTTCTAT CGACTCCCTG AGTATCCATC ACTCACAGAA TGCTTCATTA ATTGGTAAGA AAACCCACTG 000400 000401 AAGAAATAGA ATAGTGGTAC TCATTTTCAA GATTTATCTT ATCTGTATGC AACCTCTCCC TTTCCCTTCC TTGTATTAAT 000480 000481 CCCTAAAAAC GCCTGTAAAC ATTTTGTTCA TATTGTTAAA TATTAACTCA GGACGTTGCT CATTATCCGT AACACAGCTA 000560 000561 TAGGCTTGGC CCTGTTGTTT GCCATGTTCT GCCATAAAG |
Predicted Small Protein
Name | NONHSAT107105_smProtein_2:118 |
Length | 39 |
Molecular weight | 4465.3117 |
Aromaticity | 0.184210526316 |
Instability index | 51.8710526316 |
Isoelectric point | 7.77386474609 |
Runs | 9 |
Runs residual | 0.0642313019391 |
Runs probability | 0.0334452099158 |
Amino acid sequence | MSHHACPIAAIFKCAQFSDIFPLLCKTMFFRVLDVHYY |
Secondary structure | LLLLLLHHHHHHHHHHLLLHHHHHHHHHLEEEELLEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiii |