NONHSAT107131

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107131

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2725 nt

Genomic location

chr6+:3464620..3478886

Exon number

16

Exons

3464620..3465025,3465208..3465398,3465651..3465804,3466291..3466386,3466474..3466581,3468240..3468323,3468443..3468527,3473172..3473226,3475183..3475261,3476742..3477224,3477305..3477414,3477514..3477609,3477691..3477861,3477954..3478033,3478107..3478260,3478514..3478886

Genome context

Sequence
000001 AGCAATGTGA GAATGAACTA ATACAATCAG TAATTTCTCT CTGTATAGGT TTTTATCTCT ATGATGACTT TTTTTTTCTT 000080
000081 TTTAGACAGA GTTTCGCTCT TGTTGCCTAG GCTGGAGTGC AATGCCACGA TCTCAGCTCA ACTCAACCTC TGCCTCCCGG 000160
000161 GTTCAAGTGA TTCTCCTGCC TCAGCCTCTT GAGTATCTGA GATTACAGGC ATGTGCCACC ATGCCCGGCT AATTTTATAT 000240
000241 TTTTAGTAGA GATGGCGTTT CTCCATGTTG GTCAGGCTGG TCTCGAACTC CCGACCTCCA ATGATCCGTC CGCCTTGGCC 000320
000321 TCCCAAAGTG CTGGGATTAT AGGCGTGAGC CACTGCACCC AGATGTGATG ACTTTTTTAA TCAAGAAAAG GTTTAATGGT 000400
000401 TTGAAAGGGA TTACAGGCAT GTGCCACCAC ACCTGGCTAA TTTTGTATAT ATATATATTT TTTTTTAGTT TCTCCATGTT 000480
000481 GGTCAGGTTG GTCTCGAACT CCCGACCTCA GGTGATCCGC CCGTCTTGGC CTCCCAAAGT GCTGGGATTA CAGGCATGAG 000560
000561 CCACCGTGCC TGGCTGAAAA ATAAATTTTA ATGAGAGCTT AGAGCTTTTT CTTCTGCCTT GTTAACTTTA TCAATGATTC 000640
000641 CATTTCTTAA AAGTTAACAT AGAACCTTTA GGGGAGGCTG TGAAATACAT GTGTATGGAA TAACCAGCCT ACTTTTAGGT 000720
000721 AATGTAACAG AGCAGACTGG AGCCTCCAGG TTCTGCTCAC TGCAACCTCC GCCTCCCAGA TTCAAGGGAT TCTTCTGCCT 000800
000801 CAGCCTCCCG AGTAGCTGGG ATTACAGGCA TGTGCCACCA TGCCTGGCAG CCTCCGAAAG TGCTGGAATT ACAGGCGTGA 000880
000881 GCCACTGCGC CCAGCAACAT TACAAGTTTT AAAGGGAAGT TAAGAAAACC CCAAAATACC TCACCTTTAA AAAATAGATA 000960
000961 AAAGCCTACA TTCACAAGGA TAAAGTTTCA AGCCCAAAGA AACACCTCAC AGGACCTAGT GGGGAAGGTG GAGCATCTAC 001040
001041 ACCTGAGTTA CTGCCCATCA CACAGGTTGG TGTGAGGAAC CAATGAGATA ATGTGAATGA ATTCGGTATG ATTGAGTTGC 001120
001121 TATCGGAAGC TCATCTTGCA CTTCTATTAT CTGGATGAGG TTGCTTTATT TTAAAAACAC CTGACCTCGT GATCCACCTG 001200
001201 CCTCAGCCTC CCAAAGTGCT GGGATTACAG GTGTGAGCCA CTGCACCCAG CCAAGGAAGT TGCCTAGGCC GGTCTCAAAC 001280
001281 TACTGGGCTC AAGCGATCTG CCTGTCTTGG CCTCCCAAAG TTCTGGGATT ACAGGCGTGA GCCACTGCAC CCAGCCTGCT 001360
001361 CCATGATTTC TGACACTGTG GTGGAAATTC CTTTCTACTC CTCCCTCCTC CCAGCCCCAC CTGTTCTGCA GCAGAACCCC 001440
001441 CATTCTGATA CTGGTGTGTA TCTCCTCTAC CCATGCATAG GTGTACATAA TCAACATTTA GTAATGTTTT CTATTTTATA 001520
001521 CAAATAATAC TTCATACAGT TTTCTACAGC TTACACTTCA CTCAGTTCCA TGTTTTCAAG ACTTGTCTCA GTTGATATTT 001600
001601 GGAGATCTAG TGTATTCATT TTGAACATCT ATTTCTGCAT TATTTCTATG AATTTATTAA AATGTATGCA TTCGTTTACT 001680
001681 TATTGGTGAA TATGTAAGTC ATTTTTAATT GTTCATTCTC AAAAACAATG ATTTGCAGGG ACCTTGATAC TGGCTTTAAC 001760
001761 TTTGTTTCTG TTGTCTTTTG TTATATAAAA ATATTACATT TTCATTTTGT CAAACTTATC AATCTTTTTC TGTTGTGGCT 001840
001841 TATGCTTCTT TTTGACTGCA GTTTTCTTAA CAATTTTCTT AACTATTAAG AACATTCTCA GGCCCCCGCC CAGACTTACA 001920
001921 GAATCAGAAT CCACATTTTC ACAAGCCGTT TTGCGGTAGA CAATTTTCCC ATTGATGGAA CGGGGCTCGG GGGGCGGGAG 002000
002001 GTGATGGTGG TTTCAGGATT AAACTGTTCC ATCTCAGATC ATCAGGCGTT AGATTCTCAT AAGGAGCATG CAACCTGGAT 002080
002081 CCCTTGCACG CACAGTTCAC GACAGGGTTT GTGCTCCTGG TTCCTAACAG ACCACAGACT GGAACCAGGG GTCAGACCCC 002160
002161 TGCCCTAAAG GGCTGGCAAA TTCTTCCAGT TAGAAATAGG TACCCACTCA CTGGGAGGTT GGAGGACTGG CTAACTCCCT 002240
002241 TGGAATTTCT CAGGGATTCC TGATGAAAGT GAGTGGACTC ACTCCCAGGT GCCCAAACAC CTGCCCTCTG CTGGGCTGCC 002320
002321 TTCCCTCTGA TCTGGTACAA TTATTGTGGC AAGCTTTTAA TGGGAGGCAT TTGTGTACTG AACTAAGTAT CTGGGTGGCG 002400
002401 GAGTCAATAC AGTATAAATG TTTTTAGGTC ATCTGTCTTT GAGGTGGGCT GTTCACCTCC TTGTTCCCTT GTGGACCCCA 002480
002481 CTCTTGGGGT CCTGCAGCCT GTCTTCTTTC CCTCCATCAG CAGCTCCCAG GGAGAATGCA TCCTATCCCT CTGAGGTGCT 002560
002561 GTCATCTGAC ACCCTCCTGG ACAGTCCCCC TCATTTGTGC TTTAAAGTGT TTGGCAACTG CCCCTTGTCA TCAGCACTCT 002640
002641 CAGTCCCACT GTTATTCTGG TGTCTTTGAT GTGTATGTGG CTGACCCAAC TGATACCCTG ACTTCTCAGC TCCTTGACTT 002720
002721 CCTCA
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Predicted Small Protein

Name NONHSAT107131_smProtein_2417:2668
Length 84
Molecular weight 9039.5016
Aromaticity 0.10843373494
Instability index 56.9253012048
Isoelectric point 6.21771240234
Runs 9
Runs residual 0.031593038822
Runs probability 0.031708178767
Amino acid sequence MFLGHLSLRWAVHLLVPLWTPLLGSCSLSSFPPSAAPRENASYPSEVLSSDTLLDSPPHL
CFKVFGNCPLSSALSVPLLFWCL
Secondary structure LLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLL
EEEEELLLLLLLLLLLLHHHHLL
PRMN -
PiMo -