NONHSAT107154
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107154 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1316 nt |
Genomic location |
chr6+:3512211..3515891 |
Exon number |
9 |
Exons |
3512211..3512287,3513744..3513872,3514104..3514226,3514307..3514416,3514516..3514611,3514693..3514863,3514956..3515035,3515109..3515262,3515516..3515891 |
Genome context |
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Sequence |
000001 TTTATAAATT ACCCAGCCTC TGGTATTCCT TTATAGCAAC GCAACAATGA ATGAAGACAC CTAGCATCCT TGTGCTTAAG 000080
000081 AAGGCAGGCT CTGAGACCTG CTCGGTGGCA AAGAGGCAGA AAGAAAGTGC TGGTGGGGTG AAGGTGAGGA TGAGAGCCAC 000160 000161 TCCTGCCAAG CAGATCGCTG GGCGAGGGGC CTGCCGCGGG GACTCATAAT ACACTATTAG ATAATATATT ATACAAAATA 000240 000241 TATAAAATGT ATTACATTAA TATATTATAT GTAATTATAA TTGTATGTAT GATAACTACC ATGCTCGGGC TGGTCTCAAA 000320 000321 TTCCTGGACA TTTATTATGA AATACACATC CAATATTATT AACCTTTATA TATTATGTAT TAAGTTAACA GACAAGTATT 000400 000401 TTAAATTTGT CAAATTGAAT ATTACCATGT ATCAATATGC GCTGTGTGCA CAGGGACCTG GAGTGGAGAG AAGGGTGCAG 000480 000481 AGGAAGCTCA GGATGCCGTT GGCCGGGACT TAGCGGAGTT GGAGCTGCGT TCTGTAGAGG AGGCAGGGAT GACAGAGGAG 000560 000561 GCCCCGTCCT AGTGGAGGTC TCAATCCACA AGGAGGCAGG CATTGCAGGG GTCTCACCCT GGGATGAGCA TTACAGAAGG 000640 000641 CAAGTGAGGG CCCCCCAGCA CAAGGCAAGG TGGGGCCGTG GCCTGAGGCA AGAGAGGAGT CCCATCCAAG GGAAGGTCAG 000720 000721 GGGGAAGGCA GTGTTCACTG GGCGAACTGG ACAATGACCT CAGCTTGGAC CTGGGTAGCA GAGAGCACAG CAAGAAGCTG 000800 000801 GGGCTGCAGA CCAGAGGGCT GGGTGTCGGC CTCTCGCTGG TGATGAGACA GGCGGCTTCT GCGAAGGGCC AGGGATGATG 000880 000881 GAGGGGAATT GGATCCTGGA GCAGGAAAGT AGGGCATGGT TAGGGGCTGA TGGAGACCTG GCAGTGGCAC AATCTCGGCT 000960 000961 TAATGCAACC TCCACCTTCC GGGTACAAGC GATTCTCCTG CCTCAGCCTC CCAAGTAGCT GGGACTACAG GCGCACACAT 001040 001041 CACGCACGCC CAGCTAATTT TTGTATTTTT AGTAGAGATG GGGTTTTACC ATGTGGGCCA GGATGGTCTC GATCTCCCGA 001120 001121 CCTCATGATC CTCCCATTTT GGCCTCCCAA AGCTCTGGGA TTACAGGTGT GAGCTACTGT GCCCGGCCCA CTTAGTTATT 001200 001201 TTAAGATAGG GTCTTGCTCT GTTGTCCGAG CTGGAGTGCA ATGGTGCTAT CATAGCTCAC TGCAACCTCG ACCTTCTAGG 001280 001281 CTCAAGTGAT CCTCCTGCCT CAGCCTCCTG AGTAGC |
Predicted Small Protein
Name | NONHSAT107154_smProtein_929:1171 |
Length | 81 |
Molecular weight | 9224.5993 |
Aromaticity | 0.1375 |
Instability index | 77.9325 |
Isoelectric point | 9.41412353516 |
Runs | 11 |
Runs residual | 0.00131578947368 |
Runs probability | 0.044932633168 |
Amino acid sequence | METWQWHNLGLMQPPPSGYKRFSCLSLPSSWDYRRTHHARPANFCIFSRDGVLPCGPGWS RSPDLMILPFWPPKALGLQV |
Secondary structure | LLLLLHHHLLLLLLLLLLLLEEEELLLLLLHHHLLLLLLLLLLEEEEELLLLLLLLLLLL LLLLLLELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |