NONHSAT107178

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107178

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3034 nt

Genomic location

chr6-:3658052..3719882

Exon number

10

Exons

3658052..3658539,3663156..3663421,3663837..3664139,3688379..3688875,3693701..3693786,3703551..3704211,3716781..3716870,3717096..3717340,3718068..3718178,3719596..3719882

Genome context

Sequence
000001 ATGCCCCACC TTAAGAGCTG TAATACTCAC TGCAAGGGTC TGCAGCTTCA TTCTTGAAGT CAGACCAAGA ACCCAGCAAT 000080
000081 TCCCAACACA CAGGGACCAG CTTCTTTCCT AACTCACTTA GGCTCTTCGT GCTGCTCTGG CAACTAACAC CCTTGGCTGC 000160
000161 AGGGGCTTGG ACACTACCCT TAGTCACTGA CAATTGTGTG AAGGCTGCTG TCGTTAACTT CACTTGATCA CCTTAGGCTC 000240
000241 CTGTGAAGTG GTGAGCAATT CAAACAAATT CCTGTCGTCA AATCATGCAT TCATGGTCAA TAATAACGTG TCTTGAAGCT 000320
000321 ATATCTATAT TTTCATCTGT CTATCTCTTA TCTACCTGAA GCACTTCGGA AATAGATGAT CTGCTCAAAC TTGATAAGGG 000400
000401 TTAGGAGGGA GGACCCTCTT CCTAGTCTTA GAGTCCCAGC TCACCAGGGA AACATTTCTC CAGGAGGAGT GTTGATGGTG 000480
000481 GGAAGACAGG GCACTTAGAT TTCCGTGCTC TGTGTCCTCT TGGATGGAAC TATTATGGCT GACTGCTGGA TTAGACACTC 000560
000561 AAAAGTTGGT TGGCTTGTTC TAGATTCCTC TCCACCAGGT AGTGCTTGAT AGGCAATGAA CAAGTTTGCT TCTGCAATGC 000640
000641 TACGCTGGAG TGCAATGGCG TGATTATGGC TCACTGCAGC CTTGACCTCC TGGACCCAGG TGATCCTCCC ACTTTAGCCT 000720
000721 TTCAAGTAGC TGGCAAGGGC AACCCGCTCA GGTACCTTTC CACGCTGTGG AAACTTTGTG CTTTCACTCT TCACAGTAAA 000800
000801 TCCTGCTGCT GCTCACTCTT TGGGTCTGCG CCAACTTAAG AGCTGTAACA CTCACAGTGA AGGTCCGGGG CTTCATTCTT 000880
000881 GAAGTCAGCG AGACCACGAA CCCACCAGAA GGAACCAACT CTGGACACAT CTCCGGACAC AATGAGATTT GGATGGGGTC 000960
000961 ACACGTCCAG ATGATATCAT CTTCCCTGTC AGCACAGGGT CAGGCAGGTC CTCTTTCCTC TTCCTCAGAG TAGACTGTTT 001040
001041 TCCCTCATGG TGTTGACCAC ATGTGAAATT ATATCTCTAT TGTTTTGTCC CTTGTCAGCT TACCTGTTGG ACCTAAATGT 001120
001121 GATTATATCA GTTCTGTATC TGTTTGGGTT CATGGCTGTT CTCCTGAATC TAGCACGGGG CCTGATCGTG TAATACGTAC 001200
001201 TCAAGGAATC TGCAAGTCTG CAGGAAGGTG AATTGGCTCT CAGGTGTTTT AAGTGAACTG TAGGGTTGAT ACATGGCCTA 001280
001281 TATATTTACT CCCAGAAAAC TAGTCAGCCC ACTGCGTTTC ATAAAGGGAA AAGATGGTCA CAGCAGAATC CCAGCAGAAG 001360
001361 CCTGCTACAG GGCTGGTTGT GGATGTGGGG GCCAAAAGAA AACAAGTTTT ATTTTTATCA CCAGAACATT CTGATAAAAA 001440
001441 TATTATGAGA TTAGCTACCT TTATTCTCTG GGCCTTGACT CATTAAGAAG AAAAGAAAGA GCACTTGGAG GTCTGCTTGG 001520
001521 AGATCCCTGA GGTTTTTCAC AGGCACAATG TCCTTATTTG GGAGCCTCAA AATACCAGAC TAACATTGCT CAAAGCAGCT 001600
001601 TTGGGAAGAG GGCAGGTGTC TGAGATGCTG AGAGGCCAAC TGAGCAGTTT TTTAGCTGGA GCCATGGGCC ACACCAGGAA 001680
001681 CAAACCACTG GACCAAATTG ACTCAGGACA CCTGCTCTGG ACCCAGTTTC TTCTCATGTC TCCTCACCCC TAACTCTGCC 001760
001761 CACCACCTCC CACTTCCTCT CTGTTCCCCA TCCCATCCCA GGTTTGTATT TAAATTTCTG CATAATGCAT GTTCTCTGCA 001840
001841 TGTTCTGAAG TACTTTCCAT CAAGTCCTTC ATTTTAAAAG TGTTTCTTTT AAATGAAGCT GTGCATAACC TCTTTTTGAG 001920
001921 GCTCTCTTTG GCTTTTCTTG CACAATTTTA AATTGACCAG GTCTACTTGC AAAAATAGAG TCCACCTGTC CCGAGTTGGA 002000
002001 AGTCTGAACT CATGTTCCTG GATTCCTCCC ATGCATCTTG GTGCTGGTGT GGGGCCTGAA CTCAGCCAAT CCGCAACACC 002080
002081 TCCAGGAGTC TTCCTCTTAG ATGCTGAGGC CACGGAGAAG GAAGCAGCAC AAAGAATGAA CCCTGGAGAG GGTGCCAGAG 002160
002161 GCAGGCGGGT TCCAGCCATG TGGCGGCACA GCCTTACTGG GATAGTCTAG CTGTGTCACT CAGGTACGGT TGCTCTCTGA 002240
002241 GAAGCCGCCA AACCCAACCC TTTCACACAC ACCTAGGATG CACGGGGGAA GAAGAGCTCA CGGCAGGCGC CATCTCCAGA 002320
002321 AAGGATCCAC TGCAGGTGGT TGGTGAGTCC AGATGGCTCC CCCAGATGAC ACTGCTGGGT GGCAACCTAA TTATTTTTCA 002400
002401 TTAACTTTTA ATTATGGAAC ATTTCAAACG TGTGCACAAT TAAAGAGAGT CGTACAATGA ACCTCGTGTG TCCGAAACTC 002480
002481 AACTTCGACA ACGATCAACT AAATGCCCAA TCTTGTTTTA TCTGTATCTC CACACACTTC CCCCTCCACA GACTACGACA 002560
002561 ACGTGCCTAG GCCCATCAGA GTCTGCCCTC CACCCACCTT CTCAGCCTCC TCTATGATCC TCTTTTCCCA GCCTGAAGCT 002640
002641 CACGTCTCCT GACTGCTCTG GCCCAGTATC TGCCACACTC TTCATGCTTT GGTGCCTTTG TGTCTTGTCC CTCAGCCTGG 002720
002721 AATACCCTTC TCTCTTTCTC CCCTGCAGTG AATTCCTGCT CATCCTTCAA GATCAGTGGA AAACATAGCT CTTCTTTGAA 002800
002801 GCCTTCCCTG ACCAGCTCTG AGCACAGTTA GTTGTTCCTT TCCTGGAGGT CCAGTAGGAT CTAGAGTCAC TGCCTCCTTG 002880
002881 TAGAAAGACC CTTCACATGG TACCAGAGAT GGTAGTAAAC ATGCTTGAGT CAGGAAAGAC TTTTCCAACT TTTATTACTG 002960
002961 TACTAATGCA TTTAACTAAC ACAGATATGG AGACACTGTG TTGATGCCAG AGTATCTGTT ATATCCAAAT AAGG
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Predicted Small Protein

Name NONHSAT107178_smProtein_2030:2209
Length 60
Molecular weight 6210.0076
Aromaticity 0.0338983050847
Instability index 47.3881355932
Isoelectric point 6.71380615234
Runs 7
Runs residual 0.0258124708443
Runs probability 0.0258031140384
Amino acid sequence MHLGAGVGPELSQSATPPGVFLLDAEATEKEAAQRMNPGEGARGRRVPAMWRHSLTGIV
Secondary structure LLLLLLLLLLLLLLLLLLLEEEELLHHHHHHHHHHLLLLLLLLLLLLLLHHHHHHLLLL
PRMN -
PiMo -