NONHSAT107272
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT107272 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1333 nt |
Genomic location |
chr6+:4043970..4046384 |
Exon number |
3 |
Exons |
4043970..4044158,4044694..4044754,4045302..4046384 |
Genome context |
|
Sequence |
000001 CAGCAACTCT TAGCCATGAA TGTATTTGGA TAGCATCCAA TTTTATGAAA GTATTATCTT CTGTATTGTT ATTACAGAAA 000080
000081 TATAAATACC TTGCTGAAGA TAGCAACATG TCTGTGCCAT CTGAACCAAG CAGCCCCCAG AGCAGTACGA GAACACGATC 000160 000161 ACCATCTCCA GATGACATTC TGGAGCGAGT TTTAGAATAC AGTTGGTGTC CTAACAACCT CCAGAGATGT CTAATGAGAT 000240 000241 TTTGACTGTT AGCCAGGATG GTCTCGATCT CCTGACCTCG TGATCTGCCT GTCGGCCTCC CAAAGTGCTG GGATTACAGG 000320 000321 CGTGAGCCAC CACGCCCAGC TGACAGTACA CTGTTGAACG GACATGGCTG TGTTCCAGAA AAAACTTTGG CACTGAAATT 000400 000401 TGAATTTCAT CTAATTTTCA CTTGCCACAA AGTATTCTGT TCCCCCACCC CCGAACACTT ACAAATGTAA AAGTAGGCCA 000480 000481 TACAGAAAGA AGCAGCCAGC TAGATTTGGC TCACAGTCTG TATATAGTTT ACCGACTCCT GCTCTAGCAA GATGCACAGG 000560 000561 TTTATCTTGT GCATGTCCTG CCCAGAGCAG AATCAGCTAT TTCTCCAAGG ATCCCTGGTT CCATTTAATA GGAAATGCCA 000640 000641 TTTAGACATC ACAGCACACT TACTAGTGTC TGTAATTTCT GGGCCTTTGC ACTGGACAAA GTTAGGAAGT AGATACTCTT 000720 000721 TTGGAAAGGA GGAGTTTACA CAGATATTGC CAATTTAAAA TTGAGATTAT TGGGGTTTAT TAACTTATGA TTTTATATTT 000800 000801 CTATCTCTTA TTACAGTGAA AAATTTAGTT CTTAACATGA TTACAGATAG GTTATCTTGA AACTTATACA CATTAGATAT 000880 000881 CAGTATGATT ATCATTACTA CATATACTAA CTGTGGCTTA AAATTTCAGT GGTTGTTTTT AGGATACATT CTAAGTTGTA 000960 000961 TAGGCACAAT TCTCTGTCTT TTAAAATCAT TTGAAATCTC TGTATGGTAT GCCACAAATT TGATAGGCTT AGGTTTATTT 001040 001041 TCATTTGCTT TTGTTTTTTA GGAATCATCT TTTTTTCTTA ATAATACATT CTTTCATGTA TGCATGTATG TGTGTATATG 001120 001121 TTGTATCCTA CCTACACACA CAAAACCAAA CTATACATAC TTAGATCGAT ATACTTTTCC TCACTCCTTT TTATAGGCTC 001200 001201 CGCCATAGTT TATTCAGTCA GACTTTGATA TTTGAATTGT GTCCAGTTTC TGTCTATTCA TTGGGTACTG ATTATAATGG 001280 001281 TGTTGTGCAT TAAGTCATTC TTTAATTCTT GGCCACTGTG TTTTACGATA GTT |
Predicted Small Protein
Name | NONHSAT107272_smProtein_551:757 |
Length | 69 |
Molecular weight | 7828.1471 |
Aromaticity | 0.102941176471 |
Instability index | 64.2176470588 |
Isoelectric point | 8.61395263672 |
Runs | 11 |
Runs residual | 0.0212639109698 |
Runs probability | 0.0258788199965 |
Amino acid sequence | MHRFILCMSCPEQNQLFLQGSLVPFNRKCHLDITAHLLVSVISGPLHWTKLGSRYSFGKE EFTQILPI |
Secondary structure | LLEEEEELLLHHHHHHHHLLLLLLLLLLLLLLLLLLEEEEEELLLLEELLLLLLLLLLLL LLEEELLL |
PRMN | - |
PiMo | - |