NONHSAT107364
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1498 nt |
Genomic location |
chr6+:4256391..4258805 |
Exon number |
3 |
Exons |
4256391..4256579,4256950..4257175,4257723..4258805 |
Genome context |
|
Sequence |
000001 TACGCATTTG CTACATGTAT CTTGATGAGT TTGGATATAT GCATATGCCT GTGATGCCAT CACCACAACC AAGTTACTAG 000080
000081 ACATACCCAT CAAGATGGTT GTTCATTATT ATTCATTCTC ACCTTTTTCC ATGACAAAAC CCACATTTTT AGTTAAGCAC 000160 000161 AGAATTATCT GAAATAAAAA CTATATATTT GAGGGAGAGA TGGATTTCCA TCTTGTGTAA GCCGCTGCTA CTGTGGGCCT 000240 000241 CTGCTTCTGG CCAAACCTGA TCTCAACTGA TAGCATGGAA AACAGCAGAT GGAGAAGTTG CCAGAGAGTT TGAACAGAGG 000320 000321 AAAGACGGTG TCATGGAGAC AAAGAAGGGC AGAATTTCAG AAAGGAGGTG ACCTACAATG TGAAAGACGA TGAGATCTGA 000400 000401 GGACAAAGAT TAAACATCTC CAAGGCCTAG CCCCTTGCCT GGCAAAATAA CAGGAGCTCA ATTAAACACA CGAATGAAGT 000480 000481 TTCTCCTTAC AGTTCTAGCA CAATCTTTTT GATGTTCTGC TTAGTTTGCT CCTTGTGTGA GAGGGAGAGA CTTTCTGATG 000560 000561 CTGTTCCTGG CTTCTCAGTG TTTTCATCTA AAAAGTAATG ATGAAGAGGA GAGATCAGAA GGTGGAATTT CTACATAATA 000640 000641 TCTATCTGGT TGGGTGAACT GTGTCTTACT TAATTCCTCA TTCACTCATG GAGGGCACAA GGGAACCAAT TATTTTACAA 000720 000721 GACTGTGGGT TCCCAAGGGT CTCTCAGAGC CTGGAGGAGT GCACGAGGCT TCTGAAGTTC CCCTGAGCAT TTCTCAGGGT 000800 000801 AAAGGCATTC TAATAGGTAC CTGTTAGAAG ACTATTTCTG ATACAGAGAA AGGGCAGCAT TCCAACCTTT CCCCACTGTA 000880 000881 CCTCCTCTCT GGCCTAACCC CTCATTTTCT TACCCTAGTT CTCTGCCCCC AGTGAGAGCC ATTGCTCTTC CCCAACATAC 000960 000961 CTCAGGCACC GCCCTCTATG CCTCAGCTCA GGTGGTTTCT CCTCCTGGAT GTCCTCTGTC CCTGCCTCTC AAACACCATC 001040 001041 CACTCTCAGA GCCCATGCCA AATTCCATCC TCTCTAGGAA GTCTTCCTGG ATCACCCAGC AGGCACTTGT TTTTCTCCCA 001120 001121 CAATGCCTAT TGTTTCATCT TCCTTTGAAC ATCAGCACAT TCTGTCTTGT GGTGTTACTA TTATTTTTAG ATGGGTATTC 001200 001201 AGTTTCCTGA AAGGATGCTG CCTTGGGCTT CCGTATAGCC CCTGGCTAGC TAGCAGACTG CCCTGAACAG AGAAGACATC 001280 001281 ACTAGATAGC AGTTGGTTGA CTGATTGCAG CATCCTGCTC CTTAACTATG CTTTCCTTTC ACTGAAGTGG AGAACACACA 001360 001361 CACACACACA CACACACACA CACACACACA CACACACACA CACACACCAG CTACAACCAA TGCAGCCCCT GGTTTCATAT 001440 001441 TTTCATGAGG GGACTTTACA ACTTCTCATC TTGAACTGTC AGGCAGACAT TCTACAAG |
Predicted Small Protein
Name | NONHSAT107364_smProtein_977:1147 |
Length | 57 |
Molecular weight | 6321.3556 |
Aromaticity | 0.125 |
Instability index | 89.6303571429 |
Isoelectric point | 7.73040771484 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0365533600829 |
Amino acid sequence | MPQLRWFLLLDVLCPCLSNTIHSQSPCQIPSSLGSLPGSPSRHLFFSHNAYCFIFL |
Secondary structure | LLHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEEEEL |
PRMN | - |
PiMo | - |