NONHSAT107451

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107451

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3156 nt

Genomic location

chr6-:4540757..4548502

Exon number

17

Exons

4540757..4541416,4541533..4541647,4542119..4542409,4542516..4542627,4542707..4542802,4542898..4543019,4543137..4543169,4543791..4543865,4544080..4544148,4544230..4544314,4544422..4544525,4544611..4544862,4545131..4545428,4545517..4545567,4545701..4545879,4546135..4546218,4547973..4548502

Genome context

Sequence
000001 CAAACTCCTC ATTCCTCCCT ACCCCTAACT CCTGACAACC AATATTCTGC TTTCTGTCTC TATGAATTTG CCTATTGTAG 000080
000081 GTACCTCATA TAAGTGGAAT CATACAGTAT TGTCCTTTTG CATCTGGCTT ATTTCACTTA GCCTAAGGTA CTCATGGTTC 000160
000161 ATCCATGTTG TAGCATGTGT CAGAATTTCC TTCCTTTTTA AGGCTGACTT ATGGGCATAC ATCATTTTGC TAACCCATTC 000240
000241 ATCTGTTGAT AGACACATGG TTTTCTTCTA TGTTTTAGCT ATTGGGAATA ATGCTGCCAT AAATTTGGGT GTACTATTTC 000320
000321 TTTGAGACCC TGCTTTCAGT TCTTTTGGGT GTATACTCAG AAGTGGAATT ACTGGATCAT ATGGTAATTC TATAATTTTT 000400
000401 TTTCTGAGAA CCTGCCATAC TACTTCCCAC AGTGGCAGCA CTGTTTTACG TTGCCACCAA CAGTGCACAA GAGTGCCAAC 000480
000481 TTCTCTGCAT CCTTGCCAAC ACTTATTTTC TGTTTTTTGA CAGTAGCCGT TTTCAATGAA TATTTATTTA GCTCTTACTA 000560
000561 TGTGCCAATC ACTGTTCTAC ATGTTTGGGT CACATCAGAG AATGAAGTAG ACTATGGTAT TTAGAAACAA GATCAGGCAC 000640
000641 TAAATGTGCT TGTTGCTTTC TTACTTGTGT GTCTTTTTAG CGGGACAGAT CTTGGAATTA TACATATGTA TACTCCGCCA 000720
000721 TGCAAACACA AACATCAATA TTTATTTAAA AACTGAGTTG GATAATGATA CTTCTGACTC CGGTTCACAC CCCTAACCTA 000800
000801 TGCCCTTGTG AGAAACTAAT TTATTAATTA AAACACAGAA TTTGTTTTAT TCATTTGTAA TATAGTTAAA TTCATTTATT 000880
000881 ACAATTTGTA TTCCATTTTG GGTTTCTCCC ATATTGTGGT TGATTTCTTT TAAGTTTACA CTCAGTAAAA ATCACTCTTT 000960
000961 GTGGTGTACA GTTTTATGGG TTTTGACAAA TGGATAGAGT CGCATATCCA CCCTGCATCA TGACTTAGAA TGGTTCTGCC 001040
001041 ACTCACAAAA TCCACTTCTA TTGCCGGCTT TGTAGTTAAA GCTACCCTCT CCCCACGCCT GGCCTCTGGA GCCCTCTGAT 001120
001121 TTGTTTTCCA TCCATATAGT TTGTGAACCT GTGTTTTCAT TTCTCAAGGG TTAATATATA TTTACCTTTA TTAGATGCAG 001200
001201 CCAAACTACT TTCTAGAGTG GCTTTAACAT TTTCCATTTC TACCAACAAT ATGTGAGAGA TCTGTTTTAT ATCCTCATCA 001280
001281 GTACTTGGTA CTGCTTGTAT TTTTATTTTA ATCATTTTAA TAAGAGTGTA ATACTTCATT GAGTTTCTTT TTGAGATGGG 001360
001361 ATGGTGTTAT GTTGCCCAGG CTTCCTGGGC TCAGTGACTA CTGATGTTGG ACATTTCTTC AAATGCTCAT TTGACACTTT 001440
001441 CTTTGGTGAA GTGCTCTTTA GATCTTGTCC GTTTTCATAT GGGGTTGTTT TATCTTATTT GATGGTGCTT TATGAAAAGC 001520
001521 AAAAGTTTTT AATTTTGATA GAGTCCATTT ATTAATGTTT AATTTATAGG TGGTGTTTTT GGTCCTTTAT ATTTCTGTCT 001600
001601 GTGATACATT TTGAGTTAAT ATTTGTGTAT GAGTTGTGAG ACAAGGGGCT AATACCATGT CCTGATCATT GAAGTTCTGT 001680
001681 AGTTAGTTTT CAAATCAAGC AGGTGTAAAT ACCCTGACTT TTTTCTTTCT GTGGATGGAA ACTTAGGTTG ATTTCATATC 001760
001761 TTTAGATTTA ATTTTTGGGG AAATAGCCAT ACCGTTTTCC ATAATGACTG TAGTAATTTA CATTCCCAAC AATAGTGTGC 001840
001841 AAAGATTCCC ATTTCTCCAC GTCCTCACCA ACATTTATCT TTTCATATAC TTTTTGGCCA TTTGTATGTC TTCTTTTGAG 001920
001921 AAATGGCTAT TTAGGTCTTT TGTCCATCTT TAAAATCAGG TTATTTGTTT TTTAGCTAAG GTTGTCTCTT CACTCTTGAT 002000
002001 TGTTTCCTTT GCTGTGAAGG ATATTTTTTA GTTTGCTGTA ATCCTATTTG TCTATTTTTG CTTTTGTTCC TTGTGCTATT 002080
002081 GGCCTAATTT ATGAATTTAT TTCTGGGCTC TCTATCCTGT TCCATTGGTT CGTGCCTGTT TTTATGCCAA TACTATGATG 002160
002161 TTTTGATTAC TATAGCTTTG TAGTACATTT TAAAGTTGAA CAATATGATG CCTTCAGAAT TATTATTATT TTTTTTCCTC 002240
002241 AAGATTGTTT TGGCTATTCT GGGTCTTTTG TGGCTCCAAA TTTTAGGATT GTTTTTACTA TTTCTGTGAA AAATGTCAAT 002320
002321 GGAATTTTGA TAGGTTTTGC ATTGAATCTA TAGCTCACTT TGAGTAGTAT AAATATTTTA ATGGCATTGT TTTCTTAATC 002400
002401 TCATTTTTGT ATAGTTTGTG GTTAGGATAT AGAGATACAT TTGACTTTTT GATCTTGTAG GCTGCAATCT TGCTAAACTT 002480
002481 TTAGTCCATT TTGCTGTGTT GCTGTGTCAT CCCATGGTGG AAGGTGGAAG GCAACAAGAG CATGTGCAAA AGAACAAGAG 002560
002561 GGTGCTGAAC TCACTTTATA ACAAACCTAC TTTTGAGATA ACCAATCTAC TCCCATGATA ATGACATTAA TCCGTTCATG 002640
002641 AGGGCAGAGC CCTCTTAGTA GGCCCTAACT CCCCATACTG TTGCATTGGG GGTTCAGTTT CCAATACATG AACTTTGGGG 002720
002721 GACACATTCA AACCATAGCA ACTTGCTTTT CAGTTCTAAT TGGCTTTTAT TATTTTTGCA GATTCATTAA GATTTTATAC 002800
002801 ATACAAGATC ATGTCATATA TGAATAAAGT TTTACTTTTT CCTTTCTAAT CTACGTGCCT TTGAATTATT TTTGCCTTAT 002880
002881 TGCACTGACC AGAACCTACA GTAAAATGTG GAATAGAAGA GGTGAGACAA CTTTTTTTCC TGTTCCAGAT CTTATGGGGG 002960
002961 ATAGCATTCA GTCTTTCCTC ATTAAGTATT ATGTTAGCTG TAGGACTTTC CCACAGATGC ATTTATAAGA CTGAGGAAAT 003040
003041 TCTCGGCTGG GTGTGGTGGC TCACGCCTGT AATCCCAGCA CTTTGGGAGG CCGAGGCGGG TGGATCACCC CAGGTCAGGA 003120
003121 GTTCAAGACC AGCCTGGGCA ACATGGTGAA ACCCTG
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Predicted Small Protein

Name NONHSAT107451_smProtein_2990:3148
Length 53
Molecular weight 5907.7798
Aromaticity 0.134615384615
Instability index 70.6384615385
Isoelectric point 6.52642822266
Runs 9
Runs residual 0.0227075184702
Runs probability 0.0490588627844
Amino acid sequence MLAVGLSHRCIYKTEEILGWVWWLTPVIPALWEAEAGGSPQVRSSRPAWATW
Secondary structure LEEELLLLLEELLHHHHHHHHHHHLLLLHHHHHHHLLLLLLLLLLLLLLLLL
PRMN -
PiMo -