NONHSAT107480

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107480

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3156 nt

Genomic location

chr6-:4703245..4710990

Exon number

17

Exons

4703245..4703904,4704021..4704135,4704607..4704897,4705004..4705115,4705195..4705290,4705386..4705507,4705625..4705657,4706279..4706353,4706568..4706636,4706718..4706802,4706910..4707013,4707099..4707350,4707619..4707916,4708005..4708055,4708189..4708367,4708623..4708706,4710461..4710990

Genome context

Sequence
000001 TAGAATGTGA GTAGGGGAGG GGAGAAGGGA AACATCCAGG TACAAGGAGC AGAGAATAAA GACGGGAGCA CAGCGTGCCT 000080
000081 GTGGGACCTG GATGAGCCTT GGAGCAGAGG CATCTGTTGG AAGAAGTAGC TGAATAGATT GGATGGGCCT GTGAAACGAG 000160
000161 GCCCTAAAAG CCACTGGGTT CCTCCCTCCC TCCCTCCCTG TTTTAGAGGT TTAGAGATAA AACTGGTGAA ATTAAAAGGG 000240
000241 ACCAAAAAAG CAGTGGTTCT CAATCCTGGT GGCACATGAG AAAATTAAGG ATGCTGGACT CATTCTCCAG AAATTCTCAT 000320
000321 GTAATTGGTC TGGAAAGGGG ATCTAAATGT AGTTTCCTTC CTTCCTTCCT TCCTTCCCTC CCTCCCTCCC TCCTTCCCTC 000400
000401 CCTCCCTTTC TCCCTCCCTT CCTCCTTTCT TTCCTTTTAT TCTTCTTTCG ATCCTTCCTC TTTCTCTTTC TGCAGAGCAG 000480
000481 CAATCAAAAT GGAAAAGAAA TGAACATAAA GAGATTTGTT TTGTTTTGTT ATTAAAAATA TATGGCCAGG TGTGGTGGCT 000560
000561 CATAACTGTA ATCCCAGTAC TTTGGGAGGA CAAGGTGGGC AGATCACTTG AGACCAGAAA ACATTCTTTT GATTATACCT 000640
000641 AAAACATCTG CAATAATAGA TCACATATTA GGCCATAAAG GAAGTTTCAG TAAGTTCCAA GGAATCAATC CCATTCTGAC 000720
000721 AATGTTTTCC AACTACAATG CCATCACAGA ATTAATATTT TTTAAAAGAT GGCTAAAATA AAGTCCTGCT TATATTAACA 000800
000801 AAAAAGTTAA AAACAAATGA GGTTTCCTAA TAAGATATTA TCTCATATGA TAAAATGCAC ACATTTTAGA AGTCTGATTT 000880
000881 TTTAAGGTCT TGAATGCCCA GGTAAGGGAT TTGGATGGCT GGAGGTCATA CAATACAGTA AACAGTTTAA CAGACAGCCG 000960
000961 GGGGCTGTGG CTCACGCCTG TAATCCCAGC ACTTTGGGAG GCCGAGGAGG GCAGATCACG AGGTCAAGAG ATCAAGACCA 001040
001041 TCCTGGCCAA CGTGGTGAAA CCCAGTCTCT ATTAAAAATA CAAAAAATTA GTGTGGTGTC ACATGCCTGT AGTCCCAGCT 001120
001121 ACTCAGGAGG CTGAGGCAGG AGCCTCTTCT TGGATATTTG ACTTCATGGA ATGCATCTTT TCCTTAAAAA AACCTGATTG 001200
001201 AGGCCCTTAT TGTAGAAAAC ACCTGGTAGT TGGTGCCTCT GTTTTATCTT CCAACTCTGG TCTCCATCCT GAACACTGTA 001280
001281 ACCAAGTTAG GCTCTGTTCA GCATTGCTTT CACCATTCTG TTCCTTCCAC AAAAGCTTTT GGCGAGTCCC CACTGGCCTG 001360
001361 AGGTGAAAAT CTGAATGCTT TACATTAGAG TTCATGTCTC ACTGTCACCC AGGCTGGAGT GCAGTGGTGC CATCTCGACT 001440
001441 CACTGCAGGC TCTGCCTCCA GGATTCAAGC GATTCTTATT CCTCAGCCTC CAGAGTAAAG CCCGCCTTGG CCTCCCAAAG 001520
001521 TGCTGGGATT ACAGGCCTGA GCCACCATAC CCGGCCTAAT TGTAGTTTTA AAACTCTTAA ATTCCCAGAG CTCTTTGTTC 001600
001601 AAATGGAATC TCTTGTTCAA AAACATTGTA GCTCCATCCA TCAGGCAGAT GACCTCCACT GGGCCTCTCG CCTGACCCTC 001680
001681 CTCTGGTGGT TTGCTCATCA GTCAGGGACC CTGCCTCATA AAAGGCCGTA AAATGAGTGA GTTTTTTAAG GAAGAGAGGA 001760
001761 GAAGAGCTTC TAGGAGGAGG AGGTGGGTGG GTGGCCAATG GGGTGTGATA TGGTTAGGCT TTGTGTCCCT ATCCAAATCT 001840
001841 CATTTTGTCT TTTTTCTTTT TTTTGAGATG GAGTCTCATG CTCTAGGATT ACAGGCACCT GCCACCACAC CCAGCTAATT 001920
001921 TTTGTATTTT CTCTACAGAT GGGGTTTTGC CATGTTGGCC AGGCTGGTCT TGAACTCCCA TTTTGAATTG TAATCCTCAG 002000
002001 ATGTCAAGGG AGAAAAGTAA TTGAATGATG GGAGTAGTTT CCCCCATGCT GTTCACGTGA TAATGAGTGA ATTCTCACGA 002080
002081 GATCTGATGG AGGAAGTTGG CTTCCCAAGA CATGTGGAAT TTAAGCCTCT TTTCTTTATA AATTATCCAG TCTTGGGCAA 002160
002161 TTCTTTATAG CAGTGTGAAA ACGGACTAAT ACAGGGTGAA TGTTATTAAC TACAGTTCCT GGGGAGGATA AAAGGTGAGA 002240
002241 AGCAGTCAGG ACTTTGGAAT TCAGGTCACC TTGCAGTATG TATGATGTGG ATGGGTGGTT TTCATGGGCC TGAGAGCTGA 002320
002321 GTGGGAAGTG AGAAGTCTCC TTTACCTTTC TGGGACTTCA TGGAGATCAT TTCAATCTGA TCAGGATGTT TTTCTAATAA 002400
002401 AAATCACTGG GAACAGGGAT TCCTCTGGGC AAATCCCCCA ACCTCATCCC TTTCAGGGAT TGAGAAATCT CCCAACCATT 002480
002481 TTCCTGATGG CAGCTGATCA GACCAGCTTC TGTACAGATT TGCCTTGATG TCAGCATCAG AGAGGTCATC TTTAGCCACG 002560
002561 ATCAAGTCAT CCAGGGTTAC ATCATCTGCC AGCATCATCC TGCTTGTGTG AATCTGAAAG ATGCACTTCT TAGTCTTTTC 002640
002641 ATCAGGCAGG GGGAACTTGA TCTTCCTGCC AGTGCGGCCT GGTCTGATAA GTGCTGGATC CAAAGTTTCT CTTCAGTTTG 002720
002721 TGGTCATGAT ATCTTTCACA TCTCCCCTAG AATCAAATCC ATCCAACTGG TTCAACAGTT CCAACATTGT TTGCTGAATT 002800
002801 TCTCTCTCAC CACCAGAATT TGAGTCATAT CTTTTTGTCC CAATGGCGTC AGTTTCATCA GTAAACACGA TGGATGGTGC 002880
002881 ATGTTCTCCA GCAACTTGAA ACAATTCCCG TACAAGTTTG GGCCCATCAC CTAGGTACTT CTGAATAAGT TCAGAGCCAA 002960
002961 CCACTTTCAA GAAAGTGGCT GAGGTTTGGT TTGCTACCGC TTTGGCTAGC AAGGTTTTAA CTATGCCAGG TGGACCATAG 003040
003041 AGAATGACCC CCTTAGGAGG CTTTATACCC ATCTCTTCAT AATGTTCAGC ATGGGTGAGA GGAAGCTCCA CAGATTCCTT 003120
003121 AATTTCCTGA ATTTGATTAT CCAACCTCCC AGTATT
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Predicted Small Protein

Name NONHSAT107480_smProtein_275:502
Length 76
Molecular weight 8437.8124
Aromaticity 0.133333333333
Instability index 68.8094666667
Isoelectric point 10.0338745117
Runs 9
Runs residual 0.0289361702128
Runs probability 0.0576949498519
Amino acid sequence MRKLRMLDSFSRNSHVIGLERGSKCSFLPSFLPSLPPSLLPSLPFSLPSSFLSFYSSFDP
SSFSFCRAAIKMEKK
Secondary structure LLLLHHHHLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLL
LLHHHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL
LLLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiii
iiiiiiiiiiiiiii