NONHSAT107556

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107556

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1837 nt

Genomic location

chr6-:6685381..6687217

Exon number

1

Exons

6685381..6687217

Genome context

Sequence
000001 GGCTCCCAGC CGGTAATGGG AGGCCTGGAG GGGGATGGAC TTTAAAAAGG AAGCAGAAAG GCCAGGAGGA CGAGCTTCAC 000080
000081 TGGAGGTGGG TAAGTTTTGT TTCAGACCTG TAGGGCTGAA AGTGTTGACG AACACCTGGG AGAAAATGTC CAGTCACCGT 000160
000161 CACTGCAAAT GCGGGTCCGA CCTTCAGGAG AGGGATTTGG ACTGAAGATG TGGGTAGGAG CACCCTCTCT TAGACAAGAA 000240
000241 AAATTGAGAC TAAGAGGAGA TGAGATCGCT GGGGGATCAT AATTAAGTAA AAACTTGTAT CTCTAAAATC CGTCCTGACA 000320
000321 TTTTCATTTA TAGGATATAC ATATGTATGT ATCTGTTATA ATCTGAAATG TGTCCCTCAA AATTCATATT TGAAGCCCTA 000400
000401 ACCTCCTCAT ACCTCAGACT GGGACTGTAT TTGGAGATGA GGCCTTTAAA AAGATAATTA AGGTAAAACG AAGGCATTAG 000480
000481 AATGGGCTCT AATCCAATAT GTCAGGAGTC CTTATAGGAA GAGGAGATGA GGACACAGAC ACCCACAGAG GGAAGACGGT 000560
000561 GTGAGGACAC AGGGAGAGGA CACCATCTGC AAGCCCAGGA GGGAGGCCTC AGGAGAAACC AATCCCGCCC ACACCTGGAT 000640
000641 GTGGGGCTTC CAGCCCCCAG CACTGCGAGG GAATAAAGCT CCGTTGTGTA AGCTGCCGCA TCTGTGGTAT TTTATTATGG 000720
000721 CAGCCCCAGC TACTAATACA GTACCCCTAC CGATACATAC ATATTTACCC ACATGTAGCC ACACACATGT GCACATATGT 000800
000801 AATCTTTTTG CCTATAAAAA AGTAAGCAAT GCCTAAAAGT ACAGGTGGAG AGAAGGCTAA AAAGCACAGG CTCGAAGAGA 000880
000881 CTGCCAAGAT ACAACGATCC AACAAAGACA CATCGTATCA ACAGTAATGA TTTCCTAAAT GTGAAGGTAA TTTGGATGGC 000960
000961 TGGTTTATAG TTTTCATGCC CGGGAGTTTT CCAAGGCACA ATGTATACCC TTTGCGGCAG CTTACTCTCC TGAAATGTGC 001040
001041 CTTCATGAAA TTAGATAAAC AGGGAGAAGA TATGAAGTAC ATCTGCCTAA CACCACGTTA GAAGAATCCC CGGGCATTTG 001120
001121 CATCTTATGC GATGATATGC TGGCAAACCT TGGCCAACTT CCAGTCTTGT CCTTATGACA GGGGACTGCT GTGTTGAGTT 001200
001201 CCCGTCTCAG GCCTCACATC CACCTTGGCC CTGCCTTGGG AGCCTGTAGG TGTGGGCAGA AAAGAGGGAC GCTGCCTTCC 001280
001281 TGGCTGGGCC TTTCTTCACA CACAGGCACG AGGACCCAAG CTCTAAAGGA TGAAGTCCCC ATGGTCTCCG AAGTTTTCAT 001360
001361 TATCATCCCC CTCCTAAAGC TCCACCTTGG AGGCAATGCA CTGTAACAAA AGGACCAGCA CAGTGCCCAG CACACAGAAA 001440
001441 GCTATCAATC AATGTCAGCC TTAACCATTA TGTTGGTTGA CTTGCCATCC CTCTTCCTCA ACTGCAAACT ATGTGAGAGA 001520
001521 AAGATTCATG TAACCTTGGT ATTACACAAC TCCATCGTGG TGGGTTCAGT TGCATTTGTC AAATGATTCA GAGTAGGACA 001600
001601 ACGGGAATTT TCTTTACAAC ATCACAGCAT TGTAAAGTCT TTGCTTTGCA CGAAAGTGTG GGACTGAAGA AATGATTGTG 001680
001681 CAGGTTGAAA CTGTGAAGCA ATTTTAAGAA GCAACAAGGA AAATTATGAT TGTTTCATAA TCTTCAAAAA ATTTTTAAAG 001760
001761 TGTTAAGAAC TGTTTTACTA CTGGTCGTAA ATGTATAAGA ACATTTAAAG ATAGCAAATT GAATACTTAT TTAGCCT
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Predicted Small Protein

Name NONHSAT107556_smProtein_638:835
Length 66
Molecular weight 7329.6204
Aromaticity 0.123076923077
Instability index 47.5246153846
Isoelectric point 9.50958251953
Runs 7
Runs residual 0.0425961538462
Runs probability 0.0465339288869
Amino acid sequence MWGFQPPALRGNKAPLCKLPHLWYFIMAAPATNTVPLPIHTYLPTCSHTHVHICNLFAYK
KVSNA
Secondary structure LLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEHHHHHEEE
ELLLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHH
HLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTT
Tiiii