NONHSAT107588
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107588 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
902 nt |
Genomic location |
chr6+:7080514..7081693 |
Exon number |
2 |
Exons |
7080514..7081079,7081358..7081693 |
Genome context |
|
Sequence |
000001 gtcgaactat ataattgaac tatatataac tgttgttata gtgctgtaga acaccggaac ttactcctcc tatccagctA 000080
000081 GTACAACAGT ATTTAAAATA AATAAGTGGG TGAACTGAGG CTAAACCTTG AGATAAGGTT GATGcacaaa ctgtatatcc 000160 000161 tgagatccag atcatctact agacatggtc tgcagagttg gctttcagct tcctaagagc actcaaagca agaaggggaa 000240 000241 gtgattaatg atacaatttg gaaggtcctt ataatgtgaa aacaaactgg tagtgcagga gaaactcggt ttttttcttg 000320 000321 gcccccagac cttccttcca tgggtcttca caaagagaaT TTAATGTGAA CTAGCAGGAT TCCCTGTAAT AAATAAGAGT 000400 000401 ATCTGATTTA TCATACTGTG CCTCTGTGTA GACAGGTGAC ACAAAGCCAG TGCTTCATTT AATAAAAACA GTTTGATAAA 000480 000481 TGACCATAAA ATAGATTAAA TTATATTCTC TAATATTACA ATGGTGCTAT GAAAATTAAC AGAGACTGgg ctgggcgtgg 000560 000561 tggctcaaaa agaaaaaaaa agaaaGAAAA TCAACACAGA CTGGGTTACA TGCAACCTGT GATAAATTCA TTTATGAAAT 000640 000641 TTTAAACCTA CCAAGCAGTG TCATGGTAAA TGGAAATTCT ATGTGTAGGC CAGATGGAGA AAGAAGCACT TTCTATGACT 000720 000721 GTTCTAAGGA AGACCCCAGG GAGGAAGTAT GGTCTTTAGG AAGCACTTAG GAAACAGAGC TTagcacttt gggaggccaa 000800 000801 ggcaggagaa tcgcttgagc ccaggagttt gaggctgcag tgagtctaat aaaaaaaaat tacacataat aaaacaatta 000880 000881 gccaaacatg gtggcacatg cc |
Predicted Small Protein
Name | NONHSAT107588_smProtein_662:769 |
Length | 36 |
Molecular weight | 3984.301 |
Aromaticity | 0.0857142857143 |
Instability index | 49.0117142857 |
Isoelectric point | 4.44073486328 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.0278042748631 |
Amino acid sequence | MVNGNSMCRPDGERSTFYDCSKEDPREEVWSLGST |
Secondary structure | LLLLLLLLLLLLLLLLLEELLLLLLHHHHHHLLLL |
PRMN | - |
PiMo | - |