NONHSAT107654
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT107654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1164 nt |
Genomic location |
chr6+:8934517..8936581 |
Exon number |
2 |
Exons |
8934517..8934884,8935786..8936581 |
Genome context |
|
Sequence |
000001 TCTTCCCCAA CCAATAACTT TTCTTAATTT TTTTGTTCTG TTTTTATATG ATATAGACAG TGTTTATTCT AGTGGGCTTT 000080
000081 TCTTTTCTGT GGCATTCTCC ACAAAGAAAA TTCCAGATGA GAAATTCGAA TTTTTAAAAA TTTCATGTTG CTgcaggaac 000160 000161 caaaaaccaa acaccacatg ttctcactta taagtgggag ccaaatgatg aaaacatgtg gacacacgca ggggaacaac 000240 000241 acacactggg gcctgtccag gggtggggga gggagagcat caggaagaac agctaatgga tgctgatcat tcccatagga 000320 000321 tgaggggatg atctgtgcag caaaccacca tggcacacgt ttacctatgt agtcccagct actcaggagg ccgaggcaga 000400 000401 agaatcactt gaacccagga gggataagta agttgcagtg agccgagatt gtgccactgc acttcagctt ggggtgacag 000480 000481 agtgagactc catctcaaaa aataaaaaaG AGTTATAAGT TTACTTATTT CTGTATATTT GGCTCAGTTG GTAATATATG 000560 000561 AGGAAAGGAC TTAACCTGTT TGGACATTGC TACTATTTGC ATGGCATGGC CATTTCTTGC CCTTCTGAGT CCTCTTATTA 000640 000641 CACTGCATGA CTGGAATTTT AGGTAGGGAA GAACAAAGAA CCATTGTCTT CAATTGGATT AACCTTTGCA CCTTTGGCAC 000720 000721 CTCAAGTTGA GCCAGAAACC ACTCTGAAGA TGAAGTGAGA CACAAGAACT TTCCTCCAAC AGGTTCAGTT AGGAAAAGAT 000800 000801 AGGTAAGCAT GACAGCCAAA GTGGAAAATG TGAACAGACG CATAAGAAGT CACGTCTCAC TGAATCTAAA GTTTAAGCTA 000880 000881 GCCTATATTT CAATTGCTCC TATTTCTAGT AGGACACATA GTATCAACAC AAACAGTAAC TACATGTACG ACTCAGATGA 000960 000961 GCTACAATAA AGGCATTTGG TTGAATAAAA TTTTGATAAG ATAGTAATTA GTAATCTGTT TAATACCATA CCAATAGTTG 001040 001041 AAAAAGAACA AGATTTGCAG AACTGATAGA TGCCCATTAC TTTCTGGGAA AGGAAATACA ATAGTAGATG CTCAAAAATG 001120 001121 ATAATAACTT TTCCAGAAAC ATTTAAAATG TACTGTAATT AACT |
Predicted Small Protein
Name | NONHSAT107654_smProtein_557:649 |
Length | 31 |
Molecular weight | 3400.8813 |
Aromaticity | 0.166666666667 |
Instability index | 53.3433333333 |
Isoelectric point | 7.82537841797 |
Runs | 5 |
Runs residual | 0.0355855855856 |
Runs probability | 0.0484543366897 |
Amino acid sequence | MRKGLNLFGHCYYLHGMAISCPSESSYYTA |
Secondary structure | LLLLLLHHHHHHHHLLLEELLLLLLLLLLL |
PRMN | - |
PiMo | - |