NONHSAT107769
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107769 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
554 nt |
Genomic location |
chr6+:11918821..11919467 |
Exon number |
2 |
Exons |
11918821..11918968,11919062..11919467 |
Genome context |
|
Sequence |
000001 TCCCGCACTG TTATCAAGAT AAAGTCACCC CATAAATGTG TTGCTTCCTA GATAAATGTA ATCCTCCATC TAAGACAGAG 000080
000081 TGCCTGCTAT TTTCCTTGTG TTTCTGTTTG TGGTGATGAG GTCACCCAGA GGACTCAGTC TCTCCCCTAA AGCTCATTAG 000160 000161 ATCACATTAA ATTCACAATA GGTTTAAATT CACAAAGTGT ACACTGGAAT GATCAGGAGC AGGGGGTTTT AGCCAGAGAA 000240 000241 TTCCCTAAAC ACAGAGCAGG TTTGGAACCT GCTCCTTTGA AAATGTGAGG AACCCGAGTT GAAGTCGGCT TTTCTAGCAC 000320 000321 TTAAGGCAGG AGTGGGGTGC AGGGGGCTCC TTGCAGGGGA GCCTGATTCT GAGGCTGGAA GCTGGGATGA GGGAGGGGTA 000400 000401 AAGAGGGATG AGGGACCATT AGCTGTCTCT GCCGAGAGGA TCTACAGTGA GGGACGTCTG GCAGATGACA CAGTGGGGCT 000480 000481 GGGCTGGAGA TGACTTATTC CTGGATCACA TTCGTGTTTA GATGATCAAG CCAAATCACA ATTAGTTTAG TATT |
Predicted Small Protein
Name | NONHSAT107769_smProtein_35:115 |
Length | 27 |
Molecular weight | 3045.7255 |
Aromaticity | 0.153846153846 |
Instability index | 68.2884615385 |
Isoelectric point | 5.80902099609 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.0230347995054 |
Amino acid sequence | MCCFLDKCNPPSKTECLLFSLCFCLW |
Secondary structure | LEEELLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |