NONHSAT107781
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT107781 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1048 nt |
Genomic location |
chr6-:12310607..12313703 |
Exon number |
2 |
Exons |
12310607..12311538,12313588..12313703 |
Genome context |
|
Sequence |
000001 TTTTATTTCA GCACGTCTGT TCCTGCTGAC TTCGAATGAT TGTCAAGTGG CTGGACTCAG ATGTTAGCCG TCTGTCATTG 000080
000081 CTGCTAATAA CATATTCATG TACAAAAACA ACAGAGGACT CCCTCTGTTG GGTGCAATAA CTTGAATAGC TTGGGCCTCA 000160 000161 CTTCAGAGCT CTGTTATTCC ACAGGGGTAT CTAGGCAGCT GGAGCCCTCT GTGTTCCGGA CTACAGATTC GGGGACCCAA 000240 000241 AGGTGAGTCC AACTCATGTG ACTTTTGTTC ATCAGTAGCA CAGTAGATTT GATTGTTACT TTTCCTGAGC ACTTACTCAA 000320 000321 TTTCTAGCGA CAACTTTTAT TTTCATGGTC TGAACATTTG ATGATCTCTT TAAGCAACTG ATGGTTTATA GAGGTAATTG 000400 000401 TCTCTGTTGA GTGAAAGGTG ACAGAATTTA GCTAGAATCT CCTCTCTGTC TGTCTATTTT TAGTTCAAAT CTATTAAGAA 000480 000481 TATTATGCCA ACCAGGAAGT TAATATCTGG actggcgggt tttgtatttg ttggtttata tttgacatct gactgaaatt 000560 000561 ttagaaatga aattataagc tttctctgtg agtatgtctg tatttagaaa gtcctttact tctcatcgtg tgagtgtata 000640 000641 atatttttct atctcctgat aatatcaata agctagatta ggaaatgtct taaagaatct ctagtctgat ttgcttagag 000720 000721 ataaataagc atttatattg actaaatatt cctTTATTAA GAATATCCCT TTATGAAGAG AAAGAAATTA AGAAAATTGA 000800 000801 ACCTCTAATA CTTTCAGTGT GGGGATTAAA AAAGGTATTG Ttatagatat taactcagaa ataatttaga aatctaattt 000880 000881 tatgtaattt aggtactttt ttggcaaatg agtctagctt aataattttg atttaataaa tacagctaag ttttctctga 000960 000961 tttatcagtg ttaaatattg cataagcaca gattttgtta tatttgTAAA TATTTTTTAA ACTTATACAG ATTTACTAAT 001040 001041 TGAGGAAG |
Predicted Small Protein
Name | NONHSAT107781_smProtein_35:139 |
Length | 35 |
Molecular weight | 3948.5817 |
Aromaticity | 0.0882352941176 |
Instability index | 61.9588235294 |
Isoelectric point | 4.68255615234 |
Runs | 8 |
Runs residual | 0.0491437081162 |
Runs probability | 0.045806836248 |
Amino acid sequence | MIVKWLDSDVSRLSLLLITYSCTKTTEDSLCWVQ |
Secondary structure | LEEEEELLLHHHHHHHHEEEELLLLLLLLLEEEL |
PRMN | - |
PiMo | - |