NONHSAT107836

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT107836

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3152 nt

Genomic location

chr6-:14388337..14393355

Exon number

2

Exons

14388337..14391398,14393266..14393355

Genome context

Sequence
000001 GAGAGAGGGA TGGAGGAAGA GGACCTAGAG GATGAATTTA ATATAATTTG CACAAGTGAT TTTGCTCCCA ATTCCACTCA 000080
000081 GTGAACTTAG TTAATTCTTT TAAACAGTAA CATTCATTGG CTGTTAAGTA AAACAGGAGA GAACACAATA AATTTATGAT 000160
000161 ATTTTGAGAA GCTATGCCAG TTCTCAAGCA TTCAGAGAAA CAAGCTTGGC TTTTATGAGG TAATTATGAT TTAGTGTTTT 000240
000241 CTCTCGCCCT GTTGAGTCTG TGGGCTGCCT GTAAAATGGA TCTGGAATGA ATGTCAAAGT CAGGATTTAC AGTCAAACAT 000320
000321 TTTCAACATA TAAAGTACAG GAGAAGTTTA TTGTTTTGTT GGGGTTTTTT TTTTTCTAAG CAATATTTCC TTCTGCATTT 000400
000401 GTGTGCTGTT AGGTTTTGTA GGATTTCTCC CCTCCCATTT GAAATGGTAT CTATAAATTA CTTTTCCTGA TAAGGCTGCA 000480
000481 GTATCATCAA AAAGTGATGG TCTTTGCAAG CAATCGTGAC AAAGCATGTC AATTTAAATC ATTTCTTTCT CTTCCTCTCA 000560
000561 CTCTTTTTTC CTCTTACCTT CAACAGGAAA CTATCATTTC AATGTTTCCA CCCTTTCAGA AATGAGCAGG AATTGACTAA 000640
000641 GCTTGATGAG TTTGAGGTAT AAGAGATCTT CATGCTCCTT CCTTCTACCA TCTTTTTCCC CTGTTCTCTC TTTGAAATAA 000720
000721 AAACTGTGTT TGGATGTTAC CTTCAGGGAG AGCAGACTCT GGGATCATCA GGCTCCAAGG CTTTCCGCCC TTACTCTCCC 000800
000801 GTTAACATGC TGGGATTGAC ACCACCTTTG CAAAAATTAT GACGGTGAGA AAAATCTGAC ATAGGAAAAT TATGTCAGTT 000880
000881 AAAGAGATCT GACCTGACCA ACTCCATCTT GCTCATAACC TCCAAGCTGC CCTTGTTCAT TTTGGGGCAT AGGCTGAACT 000960
000961 AACTTTGGGA AGAATTTCAT TTATAGCTTA ACTTTGAAAC AACTATGATA ACAGCCCTTT CCCTGAAATG AACCCCCTCT 001040
001041 TTGCTTGGGG AACAGACCAT TTTTGTAAAA CCAACAAATT TGCCACAAGA TTAGAAATTA TGGCTCAGGA GTCATGCAGC 001120
001121 CAGAGGCCAC AAGATTCCTA ACCTCCCCAG GCACTCTTAT GAATAACATC ACTATTGTAA AACCTAAGAT TGGTGTTCAA 001200
001201 GATATTTTTC AGACCCTGCA TTCTGATGGA CCAGCTGGCA CCACCCAGAC CAGTAATCTG GGTCAACCTG TTCTGCGATC 001280
001281 CTATCCAGGA ACAGAAGATA GCAGGAAGAA CCTGCTTTGA CCCTCTGTGA TTTCATCTCT GACCCAACCA ATCAGCACTC 001360
001361 CCCATTCCCT CGCCCCCTGC CTGCCAAACT ATCTTTAAAA AACACTAGCC TTGGCTGGGT GCTGTGGCTC ATGGCTGTAA 001440
001441 TCCCAGCACT TTGGGAGGCC AAGGCAGGTG GATCACCTGA AGTTGGGAGT TCGAGACCAG GCTTGCCAAC ATGGTGAAAC 001520
001521 ACCATCTCTA CTAAAAATAC AAAAATTAGC TGTGTGTGGT GGCAGGCGCC TGTAATCCCA ACTATTTGGG AGTCTGAGGC 001600
001601 AGGAGAATCG CTTGAACCCG GGAGGCGGAG GTTGCAGTGA GCCAAGATCG TGCCACTGCA CTCCAGCCTG GGCAACAGGA 001680
001681 GTGAAATTCC ATCCCAAAAA AACCAAACCA AAACAAAACA AACAAAACCC TAGCCTCTGA ATTTTCAGGG AGGTTGATTT 001760
001761 GAGTAATAAT AAAACTCCAG TCTCCCAGTT AGCCAGCTCT ACCTGTCTTA AACTCTTTCT CTATTAGAAT TCCCCAGTCC 001840
001841 TGATAAATAA GCTTAATCTG GGCAGCGGGT AAAATGAACC CATCAGGCAG TTACAGGATC TTAGGCAGTT GTTACTGAAC 001920
001921 TGAACTTGGG TCCACTTACC CAACATGAAA AAAAAAAAAA GCCAAACACT GACACTGAAG TTTGCAGCAA AAGAAACTGA 002000
002001 GGCATTTATT GCAGAGTTCC AAGCAAGGAA GATTGGGCAG CTCACACTTA AGATCCAAAC TCCCCAGTGG TTTACAAGCA 002080
002081 AGAGTTTTCA AGGGCAGGGG TACATTTCAG GAAAGCAGAA GTTACAGGCA AAATAGTAAA TCAATACGTA GAGGTTAAAC 002160
002161 ATTGGTTTGG CCCAAAAAGG CAGGATATCT TGAAGACAGG GCTTATAGGT CATACGTGGA TTCAGAGATT CTTTGATTTG 002240
002241 CAATTGGTGA AGGGAGCAAG GCTTCGTCTA AAAACTTAGG GTCGGTAGGA AGCAATGTTA ATTAAGGGTT TGGCCTGAGG 002320
002321 GTGCGACTCT CTTGAAGCCC GTCAGGAAGA AATTTAGAAC AACAAACACT GGTCAGTCCT CACTGCCCCA TTATCTGAGC 002400
002401 TCTATGTGAC AGCAGTTGGC ATTTTCCACC TGATGGGGGT CTGGGTATCT GAAAAGCGAC TCAATAACAT ATGCTAAGAT 002480
002481 ATGATCATTA GAGTCACAAA TCACCTTGTG ACTCTAACTT GCTTGAGACA CTATTGCTTA AATTATTACT ATCTTCTTGC 002560
002561 TTATTAGGAT GTTCATTAAC TTCTCAAGGC TAGGTAGGTG CCTGGAATTT TCCTTGAAAA AAACTCAAGA TTTTTCCTTT 002640
002641 ATTTCTCTGG AGGCCTCTAA GAGGGGTCCC TGCTCCATCT CGCAGTCACC TTGCCTCTAG GAACCCCCAC CCCCGTTTCT 002720
002721 TAATTTGTCA GATAAGGCAG TGAGTGGTTT CAAAGTCCTC TTCCAACTCT AAAATGTTAA GATTACCTAC ATATGGCCCA 002800
002801 ATAGTATTAC ATTAGGTCAA CTTGGTATTT GCATGTTTGT CTTCAGAGGT AACAGAGATA GAGGGGAGGG AATGATGTGA 002880
002881 CAAAGACTCT GATCTTTTTT TTTTTCTCAG ACAGAGTCTC ACTGTCACCA AGGCTGGAGT GCAGTGTCGC GACCTTGGCT 002960
002961 CACTGCGAGC TCCGCCTCAC AGGTTCATGC CATTCTCCTG CCTCAGCCTC CCGAGTAGCT GGGACTACAG GCGCCCACCA 003040
003041 CCTCGCCCTG CTAATTTTTT GTATTTTTAG TAGAGACAGG GTTTCACCGT GTTAGCCAGG ATGGTCTCGA TCTCCTGACC 003120
003121 TCATGATCCA CCTGCCTCGG CCTCCAAAAG TG
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Predicted Small Protein

Name NONHSAT107836_smProtein_290:469
Length 60
Molecular weight 7191.4957
Aromaticity 0.237288135593
Instability index 54.2915254237
Isoelectric point 9.94366455078
Runs 8
Runs residual 0.00886331830197
Runs probability 0.0445813460519
Amino acid sequence MSKSGFTVKHFQHIKYRRSLLFCWGFFFSKQYFLLHLCAVRFCRISPLPFEMVSINYFS
Secondary structure LLLLLEEELLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEELLLLEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
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