NONHSAT107933
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107933 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
738 nt |
Genomic location |
chr6-:17812275..17817421 |
Exon number |
2 |
Exons |
17812275..17812841,17817251..17817421 |
Genome context |
|
Sequence |
000001 AGAAGAAAAG AGAAGTGCCC TAGAGGAGCA GCGGCTCATG TATGAGCGGG AACTGGAGCA ACTCCGCCAG CAGCTCTCCC 000080
000081 CCGACAGGCA GCCACAGAGT AGCGGCCCTG ACCGCCTGGC CTACAGCAGC CAGACAGCGC AGCAGAAGGT GACCCAGTGG 000160 000161 GCAGAAGAGA Ggaaagacat ggaatcaacc taaatgtcca acgatagact ggataaagaa aacgtggtac atgtacacca 000240 000241 tggaatacta tgcagccatg aaaaacaaca agatcgtgtc ctttgcagga acatggatgg aactggcggc catcattctt 000320 000321 agaaaacgaa tgcaggaaca gaacaccaga taccgcgtgt tctcactaat aagtgagagc taaatcatgg gaaccgatgg 000400 000401 acagaaaggg gaacaacaga cactggggcc tgtgggagga ggagggagag gctcaggaaa aaaaaacaaa aacctgccaa 000480 000481 gtactatgct tactacccgg gtaatgaaat aatccataca tcaaacccct tagtcatgag ttgacctgta taacaaacct 000560 000561 gtgcatgtac ccctgaacct aaaataaGTC aaaatattta aattttaaaa aaCAAAAGTA TCTGATAAAG AAGGTGGTTT 000640 000641 GCTTTTAACC ATAGTGTTTT TCAGTTAAAT AGTTAAAAAT ATTTTTTTGA TTTCCCTTAA TTCCAGATTG ATTTTCTTTG 000720 000721 GGGCTTAAAT TCTTAAAA |
Predicted Small Protein
Name | NONHSAT107933_smProtein_230:382 |
Length | 51 |
Molecular weight | 5985.9544 |
Aromaticity | 0.14 |
Instability index | 42.95 |
Isoelectric point | 9.59808349609 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0226599148167 |
Amino acid sequence | MYTMEYYAAMKNNKIVSFAGTWMELAAIILRKRMQEQNTRYRVFSLISES |
Secondary structure | LLHHHHHHHHHLLLEEEHHHHHHHHHHHHHHHHHHHHLLLLHHHEEEELL |
PRMN | - |
PiMo | - |