NONHSAT108068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
562 nt |
Genomic location |
chr6+:22191800..22194749 |
Exon number |
2 |
Exons |
22191800..22191885,22194274..22194749 |
Genome context |
|
Sequence |
000001 ggagaccaga aggccaaaat caaaagtatg ggcaggcttg atttctttag aagactccag cggagaactg tgtctccttg 000080
000081 cttctgATTC TACATCTCCA TCCATGGGCC ACTGTTTCAG CAACCTCAGC CAGTGCAACA CAACCTCAGC CAAGAAGAGT 000160 000161 ATGCAGAGAA AGGAGTCCCC TACCTGCCAC AAAACTGTTG TCTGAAAACT GTCTCATATT GTCTCAAGTT GTCATTCATT 000240 000241 GTGAATTAGA CCTGTTTAAC ATGTAATCTG CAACATGCTT CACTGTCTAA TTTTCCAGAG CCCCTCATAT AAGGAACTGT 000320 000321 ATTATTGGTA TAATCATCAT GGTGAAGAAG TTGGTATGTG GGGGAGAGAT GACAGAAACA GAGAGTAAGT CAGAGCTGGC 000400 000401 TGCCTGACAG ATAAAAAGGA AATGACCAAA AAAAAAAAAA AAGACACAGA AGAATACTTT GTTGTCCACA CAGAAAAGGG 000480 000481 AAGTGTAGGT AAGACAGCAG TAGACTAAGA TTCTTAAGAC TCAAGTTCTA GTCTTATTTA TTAGCTATGG GAGGCCTTGA 000560 000561 GG |
Predicted Small Protein
Name | NONHSAT108068_smProtein_338:406 |
Length | 23 |
Molecular weight | 2341.7211 |
Aromaticity | 0.0 |
Instability index | 40.2681818182 |
Isoelectric point | 4.94464111328 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0387210740153 |
Amino acid sequence | MVKKLVCGGEMTETESKSELAA |
Secondary structure | LEEEEELLLLLLLLLLHHHHLL |
PRMN | - |
PiMo | - |