NONHSAT108450
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108450 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
813 nt |
Genomic location |
chr6+:28234912..28240364 |
Exon number |
2 |
Exons |
28234912..28234991,28239632..28240364 |
Genome context |
|
Sequence |
000001 CGAAGAGCTA GAGCTGACAC TCGGCGATGA GCTAAGACGC TGTTTCAGAG CGTTTGGGTC CTCTGAGGCC CCTTGACCAG 000080
000081 GAGTGTCTCT GAAGATACAG TCCAAAGAAA GTTCTCCAAA ACAAGGAGAA CAGTCTGAAG CTGGGGATGG CAACAGCATT 000160 000161 GGTGAGTGCC CATTCCCTGG CTCCCCTGAA TCTGAAGAAG GAGGGGCTTC GGGTAGTGAG GGAGGATCAC TACTCTACTT 000240 000241 GGGAACAGGG ATTCAAGCTG CAAGGAAACA GTAAAGGCCT TGGACAGGAG CCATTGTGCA AACAATTCAG GCAGTTGCGT 000320 000321 TATGAAGAGA CCACAGGACC TCGAGAAGCA CTAAGTCGGC TCCGGGAGCT CTGTCAACAG TGCTACAGCC CGAGACCCAT 000400 000401 ACCAAGGAGC AGATCCTGGA GCTGCTGGTG CTGGAGCAGT TTCTGATCAT CCTGCCTAAG GAGCTCCAGG CCCGGGTGCA 000480 000481 GGAGCATCAC CCAGAGAGCA GGGAGGACGT GGTTGTTGTT CTGGAGGATT TGCAGCTGGA TCTTGGAGAA ACAGGACAAC 000560 000561 AGGTGGTAAG GGTCAGATGT GCTCTTTTTC AGGAATGCAG GAATTGAGAT CTCTGGCCAG ACAGGTGGAC ATGGGCTCAT 000640 000641 CAGCGGAAGG AGAATTACTA AGCTTTGATT CAGTTTTTTT CCAGTCTAGC TGTTAATTTC CTTAGGTCTT ACCTCAACCT 000720 000721 TACCTGGCCC TTGCTTGGAG AAAACTGAAT GTGCACCAGA TTCCCCATCT TCTTTTCTTT GCCCCTCTGG GGTTTCTCTT 000800 000801 TCTTCTCTTT TTT |
Predicted Small Protein
Name | NONHSAT108450_smProtein_146:445 |
Length | 100 |
Molecular weight | 11502.0087 |
Aromaticity | 0.10101010101 |
Instability index | 58.6202020202 |
Isoelectric point | 9.36199951172 |
Runs | 16 |
Runs residual | 0.027926322044 |
Runs probability | 0.0471592916446 |
Amino acid sequence | MATALVSAHSLAPLNLKKEGLRVVREDHYSTWEQGFKLQGNSKGLGQEPLCKQFRQLRYE ETTGPREALSRLRELCQQCYSPRPIPRSRSWSCWCWSSF |
Secondary structure | LHHHHHLLLLLLLLLLLLLLLLEEEELLLLHHHHHEEEELLLLLLLLLHHHHHHHHLLEE ELLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |