NONHSAT108466
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108466 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
494 nt |
Genomic location |
chr6-:28423425..28423918 |
Exon number |
1 |
Exons |
28423425..28423918 |
Genome context |
|
Sequence |
000001 AATGAAAGTT TCCCAGAGGA TTTCATTCTC ATGGGCTTTG TCAAATATCC ATGGCTGGAT TTTCTTCTCT TCTGTGTCCT 000080
000081 CTTGACCTTC TACATGTTCA CATTGTTGGG AAATAGTGCT ATTATTCTGG TCTCTCAACT AGATTCCCAA CTTCATAGTC 000160 000161 CTATGTATTT CCTTCTCACC AGTCTTTCCG TCTTATATCT CTGTTTCACC ACCACAACAG TACCTCAAAT GCTGTTCAAT 000240 000241 TTAGGGGGCC CAACAAGAAC ATCACTTAAA TAGGCTGTAT GGCCCAGGCC TATGTATTTC ACTGGCTAGC CTGTATTGAA 000320 000321 TGTGTCCTTC TTGGCATCGT GGCCTTAGAC TGCTATGTGG CTGTCTGTAA GCCTCCAAGG TACACTATAA TCATAGACCA 000400 000401 TAAGGTCTGC CTGCACCTGT CCAGCACTGC TTGGCTAATT GGTCTGGCCA ATTCACTGCT GCAGTCAACA ATCACAATTC 000480 000481 AGTTGCCCCT Gtag |
Predicted Small Protein
Name | NONHSAT108466_smProtein_278:493 |
Length | 72 |
Molecular weight | 7869.4225 |
Aromaticity | 0.0845070422535 |
Instability index | 49.1690140845 |
Isoelectric point | 6.78717041016 |
Runs | 12 |
Runs residual | 0.0204595997035 |
Runs probability | 0.0310236707296 |
Amino acid sequence | MAQAYVFHWLACIECVLLGIVALDCYVAVCKPPRYTIIIDHKVCLHLSSTAWLIGLANSL LQSTITIQLPL |
Secondary structure | LHHHHHHHHHHHHHHHHHLHHHHLLEEEEELLLLEEEEELLLLLLLLHHHHHHHHHHHHH HHHHEEEELLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHH HHLLLLLLLLL |
PiMo | oooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTT TTooooooooo |