NONHSAT108477
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108477 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
804 nt |
Genomic location |
chr6-:28616086..28622254 |
Exon number |
2 |
Exons |
28616086..28616843,28622209..28622254 |
Genome context |
|
Sequence |
000001 cggcaattgc aatacagtgg tatttgtgta tccgaacata cgaaagCTTC TACAAGGTGC GGATCCATAA GGAAGATATT 000080
000081 AGGAAACATC TAATTGAAGC TTGAAGAACC AAAATGAGGA AGGCAGAATT AGGAAAGACC CTGTCCGGTG ACGCCTCCCC 000160 000161 TTCTGGTTTC CATCTGTGCC CCCTCTCAGG AGCCGCGGGA ACACAAGCCT CGAGCAGGCA AAGTCTCTTT GGATTTGAAA 000240 000241 TACAAAACCG TTAAGTGAGC TCCGACCAGG TCGCCTCCCA GCTGTCGCCT GCTTTCTCTA AAGCAGTGAT CTGGCAGCTG 000320 000321 TTTGGAGAGT CTGAACGCGT TAACAGTTTT TGTTTTTCAG CGCATCCGTG TGCTATCTTC TAATTGGCCA GAAAAGCCAT 000400 000401 TAATGTGATG AAAATTCTGA ATGATCTGTT TTGCTAGAAA AGCTTTTCAC TCCACTTTTA GAATCCAACC ACTTGATGAT 000480 000481 TCGAAATCAC CGCAATGCCA TGGAATGTAA AAACTGCTCT CGCCACGTCT AGAGACCGAT GCCTCTTCCT CCGCTGGGAA 000560 000561 CATGGTTCAT CTCCACTCTC CGATTTCACG GTTTTATTTG CCCTCTGGGA CGCGCTGACA TTGTTCTAAG CACATTTTCT 000640 000641 AAGTGATTGT GTGAGTGTGG GTGTGTTTTG TTGGACTTGA AGGGAGTCTA ATTTCTAGAA GTTCCTTTCA GGAGTCTGCC 000720 000721 TTTACTGCAA AGTTGATGTA TTCGAAAACA CAGTAACTCT TAATGGCAAC AGAATTTGTC ACCTAATTAA GTGCAATTCG 000800 000801 GTCA |
Predicted Small Protein
Name | NONHSAT108477_smProtein_113:253 |
Length | 47 |
Molecular weight | 4810.3444 |
Aromaticity | 0.0652173913043 |
Instability index | 45.1934782609 |
Isoelectric point | 9.30059814453 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0398213339389 |
Amino acid sequence | MRKAELGKTLSGDASPSGFHLCPLSGAAGTQASSRQSLFGFEIQNR |
Secondary structure | LLHHHHLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLEEEEEEELL |
PRMN | - |
PiMo | - |