NONHSAT108559

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT108559

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3622 nt

Genomic location

chr6+:29866808..29870429

Exon number

1

Exons

29866808..29870429

Genome context

Sequence
000001 CATGACCTTT GGCTGGCTAG GGAGGGGATG CAATGATATA AACATTTATC CCCTGATACC TCATGTTAAA ATCTGATGCC 000080
000081 CACTGTGGGA CGTGGGGCCT AATGGCCACC ATTTGGGTCA TGGTGACCAA TCTTTTATGA ATAGAGAGAT ACTGCCCTCT 000160
000161 CTTGGGAATG AATGAATTGT TGCTTTATTA TTTTCCAAGA GAGCTAGTTG TTAAAAAGAC CCTGGCAACT TCCTACTCTC 000240
000241 TCTGTTCCTC TGTTACCATG TGTTCTCTGC ATATACCAGC TCACCTTTGT CTTCTGCCAT GAGTGGAAGC AGCCTGAGGC 000320
000321 CCTCACTAAA TGCGCAAACA TTTCCAGACA TCAGAATCTT GAGCCACATG AACCTTGTTT ATATAAATTA GTCAGTCTCA 000400
000401 GACATTTCTT TATAGCAACA CAAAATGGAA AAAGATAACA CTCGCATCAC AGGTATGTGT CTCTGGCAGC TAGCCACCGT 000480
000481 TCTTAAGATA TCCAGGATCC ACTCAGCCAA GAGTCTTCTC ATCAGTACTC TAAAGACACT TATCACTCAA GAGAGTCTAA 000560
000561 GGTTTTTAGG AGAAACCAGG GACAAAGTCT AAATGTTTTT GTGATAACTC AGATTGCCCA CTTTTCTTTG ACCACATATC 000640
000641 TTTTACAGGA AAAAGGATTG TAACAGTAAA GAGGTATTGG CATATTATCA GAGTCTCATC CATTCATTCA AAATTAGGCC 000720
000721 AGTTTATCAT CCTCTTGTAT GAATATGTCT CCCAGAATGA AATCACTCAG CTTTGCTGAC AACACTCAAT CTTACCAGGT 000800
000801 TCCAAAAACA AGAATGGTCT CAGGGACATA CAGCTTCACT CTTTTAGGCA TCCAGTATAA TTGACCTAAG TGACAATATC 000880
000881 TTCTCTTGCT CACACCACCT TTGAGGAGTT AAGCTAATAT TGAATTTTTC TCATTATATA ACCCTTTGAT TTATTCACTT 000960
000961 GCCCTCAGCC ACTATTCCTC CCTCTGTCCC TTTATATCAG TTGTTTCCAG GTTTGGGAGT GACATTAGGT TTGTCTGCTG 001040
001041 GGCTGGCCTA GACTGCAGGC AGCAATAGTA TTCTAGCATG TCTTCCCTCA GTCTAGTCTT GATCATAGAG GGTAGGTTAT 001120
001121 ATAGGTAAGG AACTAGTGGG GGCTATCAAG ACCACCAGGC TATATAACTC TACTTACTGT TAATCCTAAC TTTTCCAGAT 001200
001201 GAAATGAATA CTTGAGAATT CTTACATAAA GGTATAAAAA TATAGTTATG GTTTTTGGCT TAGGGATAAT TCCTGTTTCT 001280
001281 GGCACTTTTA TTTACATCCC TATTCCTGGT ACTATGGCAT AACATATGAA AAAATAAATT TGAGGTGAAG TGTAGTCTTT 001360
001361 ATTCCAGCAT CCTCTCCTCT TCAGAAGAAT TGTATGTATC GTCATAACAG CATCGTCCTG ATCCATCAGG TAAAAGAGAG 001440
001441 GATGCTACCT AGTGGAGTTA TTCTTGCAGC CCCACTCATG TTGACAGCGA GCACATTCAT GAAGATATAA AAGCCAGTCC 001520
001521 TTCATGTTTA TATTGCCCAA CAATTAGATT GGCAGTTTTT AGACAAACAA TGTTTCAATT GACCATTTCA ATTTTCTATC 001600
001601 AAATTTTCCC CTGAGGAGGA CATGTCCCTC TGCATTGTTG GCCATTTGAG GCTGTAAAGT GTGTTTTCTT GTGTAAAGAA 001680
001681 GTGTGACTCG GCAGTCCAAA TTGGTGCAAT CTCTTCTTTT CTGGTTCTTG TATAGCCCTT GAAGCATTGA CATCTACCCC 001760
001761 TGGTTGAGCA TAGCCCAATC CAGAGTCAGT GATTTTCCTG TCAAGATCCA TTGGCAGCTC CTTTGGGGTT GCTGGCATCA 001840
001841 TTCTGGCTTG CCAGGTATTA TGATCAAAGC CTTCCCACTA GAGAATCTGT CACATCTCCA TCTGCTGCCT CTGTCTGTTT 001920
001921 TCTTGACCAA CAGTGAAAAA AGAGATTATG AGAAATAAGA TAAATTACCA AAATTGTGAA CAAAAGAGAG ATTATCACTA 002000
002001 ATGACCCTTA GGAAGTTAAA AAACATTATA AGTGAATACT CTGAAAAACC TGAAGCCAAT AAGTTAGACC ACTTGGATAA 002080
002081 AAAGGACCAA TTCGTGCAGA GATAGAAATT GCCAAAACTG ACCCAAATTA ACTGGAAAAC CTGAAGAGAA CTGTGAACTA 002160
002161 AGTCAGAAAT TGAAAAACCT TCTCAAAAAG AAATGCCAAA GCCCAGATAT CTTCACTGGT GAATTCTATC AAATATTTTG 002240
002241 AAAGCTCTTT CAGACAAGAA GAGAGGAGGG AAGACTTTCC AGCCCATTTA CAGAACTGGC ATTACCCTCA TATCAAAGTC 002320
002321 ACAGCAAGAC TCACAGGAAA AGAGTGCCAT ACACCAGTGT CACCAATAAA CATAAATGAA AACATCCTTA ACAAACATTG 002400
002401 GCAGATAATA CAAAGCCACA TAAAAAAGGA TTACACTCCA TGACCAATGG GATTCATCCC AGGAACATAT GGTTGGATTA 002480
002481 ACATTTGAAA ATCAGTTCAT GGAATGCACT GTATTAATGG AAAAAAAGAC ATAATTATCT CAAAAGATGC AGGAGAAACA 002560
002561 GTTGACAAAA ATGTTAACAT CACTCATGTT CATAAGTTTC AACAAAATAG GAATGGAGGA GACCTTCTTC ACTCTGATAA 002640
002641 AGGGCGTCTA TAAAAAACCC ACAGCTAAAA TCAAACTTAA TGAAGAAAGA CTGAAGACTG AATGCTTTTC TCCTAAGATG 002720
002721 GGGATCAATG CAAGGATGTC CAATCCCACC ACTTTTATTT AATATTATAC TGGAGATTGT AGCCAGTGCA ATAAGGCAGA 002800
002801 AAATTAAAAA TTAAAGGCAT CCAGATAAAA AGGAAAACAT ACAATTCTAT TCACAGATAA CATGACCCTG TCTGTAGAAT 002880
002881 TCACAAGCAG ATAAAAACTG GCTAGCACTA ATAAATGAAT CCAGAAGGGC CCATAGGATA TCAAATCAAT ATAAAAATTA 002960
002961 ATTATTAACA TATTTCTCTA TAGAAGCAAT GAAAATCTCA ACTTTCCTAT CACAGTAGTT ACCAGAAGAG CGAAATAGGA 003040
003041 ATAAATTTAG GAAGACAGCA GTGTTTGTTC ACTGAAAATA AAAAAACATT CCTCAGAGAA ATTAAAGGTC TAAATAAATG 003120
003121 GAGAGATGCG AGTTGGAAAG CTCGATAATA CTGTTAAGAT GGCAGTTCTC CCCCAGTAGA TCTATAGGTT CAACACAATC 003200
003201 CCTATCAAAA TCCCAGCAGG GATTTTATAG AAAATTGACA AAATAGGCCG GGCGCGGTGG CTCATGCCGG TAATCCCAGC 003280
003281 ACTTTGGGAG GCTGAGGCGG GCGGATCATG AGATCAGGAG ATCCAGACCA TCCTGGCTAA CACGGTGAAA CCCCGTCTCT 003360
003361 ACTAAAAATA CAAAAAATTA GCCGGGCGTG GTGGCAGGCT CCTCGGGAGG CTGAGGCAGA AAAATGGCAT GAACCCGGTA 003440
003441 GGCAGAAGTT GCAGTGAGCG GAGATCGTGC CACTGCACTC CAGCCTGGGT GACAGAGCGA GACTCCGTCT CAAAAAAAAA 003520
003521 AAAAAAAAAA AAGAAAAGAA AAAAAGAAAA GAAAATTGAC AAAATAATCC TAAAAATGTA TATGAAAATG CAGAGGATGC 003600
003601 AGAAGGGCCA ACACAAATTT GG
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Predicted Small Protein

Name NONHSAT108559_smProtein_2546:2761
Length 72
Molecular weight 8254.8153
Aromaticity 0.0985915492958
Instability index 49.2
Isoelectric point 9.77935791016
Runs 12
Runs residual 0.0204595997035
Runs probability 0.0295736913384
Amino acid sequence MQEKQLTKMLTSLMFISFNKIGMEETFFTLIKGVYKKPTAKIKLNEERLKTECFSPKMGI
NARMSNPTTFI
Secondary structure LLHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHLEEELLLEEEELLHHHHEEEELLLLLLL
LLLLLLLLLLL
PRMN -
PiMo -