NONHSAT108898
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108898 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
564 nt |
Genomic location |
chr6-:32178703..32182014 |
Exon number |
5 |
Exons |
32178703..32178713,32180251..32180404,32180912..32181029,32181465..32181617,32181887..32182014 |
Genome context |
|
Sequence |
000001 CGTGGGTTGG ACGGGGCCAG AGTGTGAGGC AGAGCTAGGG GGCTGCATCT CTGCACCCTG TGCCCATGGG GGGACCTGCT 000080
000081 ACCCCCAGCC CTCTGGCTAC AACTGCACCT GCCCTACAGG CTACACAGGA CCCACCTGTA GTGAGGAGAT GACAGCTTGT 000160 000161 CACTCAGGGC CATGTCTCAA TGGCGGCTCC TGCAACCCTA GCCCTGGAGG CTACTACTGC ACCTGCCCTC CAAGCCACAC 000240 000241 AGGGCCCCAG TGCCAAACCA GCACTGACTA CTGTGTGTCT GCCCCGTGCT TCAATGGGGG TACCTGTGTG AACAGGCCTG 000320 000321 GCACCTTCTC CTGCCTCTGT GCCATGGGCT TCCAGGGCCC GCGCTGTGAG GGAAAGCTCC GCCCCAGCTG TGCAGACAGA 000400 000401 CTCTGATGGA CTTATGTGCC CAGAAGCCCT GCCCACGCAA TTCCCACTGC CTCCAGACTG GGCCCTCCTT CCACTGCTTG 000480 000481 TGCCTCCAGG GATGGACCGG GCCTCTCTGC AACCTTCCAC TGTCCTCCTG CCAGAAGGCT GCACTGAGCC AAGGCATAGA 000560 000561 CGTC |
Predicted Small Protein
Name | NONHSAT108898_smProtein_179:310 |
Length | 44 |
Molecular weight | 4175.8903 |
Aromaticity | 0.0 |
Instability index | 59.7488372093 |
Isoelectric point | 7.97601318359 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0455245161128 |
Amino acid sequence | MAAPATLALEATTAPALQATQGPSAKPALTTVCLPRASMGVPV |
Secondary structure | LLLHHHHHHHHLLLHHHHHLLLLLLLLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |