NONHSAT110240

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT110240

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1588 nt

Genomic location

chr6+:33862916..33864503

Exon number

1

Exons

33862916..33864503

Genome context

Sequence
000001 TCTTTGAGGT GGAAACCAAT TGCATGGATC AAATGGTCCT GATGGTGCAT AGAGCCTTAG GTTTGGAAAG AAGTGAAGGG 000080
000081 CCTTGCCGCC TTGCTGGGGA CTTGAGCCTC TCAGCCATTG GTGCTCTCTG GAGCTGCCCG CCCACCAGGG GCAATGGCCC 000160
000161 TTGTTGGCCT CCAGGCCCCC TCCTTCCCTG GATGCTGTGC TGTTCTCCTC TTGGTCTTGT TTCATTGGCT GTGGCAGAAA 000240
000241 CTTTGGTCCC AACAAGGCCC AGGAAACAGA CCCTAGCAAA GACCTGAGGC AACTGGGTGC CCCAGGACCA CAGGAACTCA 000320
000321 TGTGTGCTGT GAGGGCTTTA AGAGCTTTGA AGTGGGGAGT CTCTGACGTG GATCAGGGCT ATGGGTGCTG ATGCTGTCAA 000400
000401 TAAGCCACAC GCAAAGGTTG GGTCAATATG ACTGCTTCTC AGACCCTCTT CGGAGGCAGA CTCTCCCTCA CCTGCCTGGC 000480
000481 CAAATTCCCT CTGGGCAGAA GGACCCTAGG GAGCTTTTCC TGGCCCATGT GGCAGAGGCC CAGGCTCCCA CTCAGACAAT 000560
000561 GACCCCTTGC TTTGCCCACT GAAAGAAGTC CCCAGAAGAT GAGCTCTGTT ACAAGCAGAA CAGAAAAGAA ACAGTGGGAT 000640
000641 TAGGGCTCCA AAAACCCTCC AGAACTATCA GAGAATTCTG GACAGTGGTC CCTGATGGCA TCTGTGTTAG GGGCTGGGAA 000720
000721 CAAGAACCCC TCTCACAGGC ACCTCTACAG GCGGGGTTAA GACTGTCAAA TACTGGCCGA GGCCAAGGGA GACTCTGTCA 000800
000801 TGTCTGAGGC CATAGGCATG TTTTCTTCTG GACTTCAGCG AGAGGCAGAG CCCCCAGCCC CATGCAGTCA CCTCAGCTCT 000880
000881 GCCTGAGAAG AAGCGAGGGA AGCCCATTCC TCCCCATCAG TTGGCCTCTG GGGAGGCAAA GTCAAGTATG TGATGGTTCC 000960
000961 TTACCTGTGC AGGGAAAATG GAACTTGGGA GTCAGCTGTC TGAAGGCATC ACGCCTTGTA TGACCCTTGC AAGCCCAAGC 001040
001041 TACCTACCTG TTCCTGTACA GAAACCCTCC CTGGCCTCAT CCTGTGGGTG GCAAACCCAC ATATTCAGTT ATTGCTGTTT 001120
001121 TCTTCCTTCC TTGGATACTT GTCTCCAATA AATATTTACA GTGGGACCCA CAGATGAACC TTAGCCCCAA ACATAAGATA 001200
001201 GCTATGTCAA AAGGGGTCCT GGGACAGTGA TACCCCAGGG GGGTCAGGCA AAAACAGAAG CAAGCCTCTT GGCCACCTCC 001280
001281 TCCCTTAGCC TTCTGCGTAA AGATGGACTT GCAGGAGGAG AACACACCCT GCAACTACAG AACCTCATGG TACGGAACCA 001360
001361 CCAGGGGATC CTCGCCCACG GCCCTGGGTG GAATTGATGT TGGGAAGATA GATTAGTAGT GAGGCGCATC ACCCCACTGT 001440
001441 GACTCACCTT CTTCTGCCCC CACGCCTGTC CTTCAGACCA TCTCCCTGCT GCGGCAGAGC CACTGAGTTC AGGGAGCAAC 001520
001521 TGTGGGCAGA TGAAATTGGG CTGTGGTGGG TGTGGGAATC CCTGTGGACT TCCAAAAGCA CTTCGGTT
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Predicted Small Protein

Name NONHSAT110240_smProtein_23:286
Length 88
Molecular weight 9292.0022
Aromaticity 0.0344827586207
Instability index 42.5264367816
Isoelectric point 8.78692626953
Runs 9
Runs residual 0.0348111658456
Runs probability 0.0528371508763
Amino acid sequence MDQMVLMVHRALGLERSEGPCRLAGDLSLSAIGALWSCPPTRGNGPCWPPGPLLPWMLCC
SPLGLVSLAVAETLVPTRPRKQTLAKT
Secondary structure LLHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEE
LLLLHHHHHHHHHLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHH
HHHHHHHHHHLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTT
TTTTTTTTTTiiiiiiiiiiiiiiiii