NONHSAT112336

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT112336

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2140 nt

Genomic location

chr6-:38874271..38920883

Exon number

5

Exons

38874271..38875613,38890861..38891343,38892689..38892827,38904069..38904168,38920824..38920883

Genome context

Sequence
000001 AGTGAAGCCC ATGAGCCACT AGAAGCCACA TGTTCTGCCA TGTGGAGAAG AATGAGAGAG TACATCCTCA AATTGAGGTG 000080
000081 TGGCATGATG ATTTGGCTGC CCAGAGGAGA ACCTGTCTTT CCCATCTAAA GTGGGAGGTC AAGCCAAGTA GAGGGAAACA 000160
000161 GCAACTGGAG AGCAGATTTG CAAACCAGAA AAGCAACTCA TGAATACAAA TTGCCTGGAA AGCATTTATT ACAACAGAAG 000240
000241 CTCTGCAAGA TATACCGGAA ATTGACAGTG GCATCGAATT CCCAGCAAGG AAGTTTTCTA AGGACACCAA CAGACACCAG 000320
000321 CAGAAGACAG CCTTGCATTT ACAACAAACC ATTGATCCAC AACAAACCAT TGATCCACAC TTTCAAAATC ATTGAGGTGA 000400
000401 AGCATAGAGA ACTGGAGTGG AGACGGCTCT GGCAAATCCA AACAATATCA AAAGCACTCT CATACTGAAA ACCCACAGTG 000480
000481 CTGAACCACA GCTGAGATGT AAAATATTTC ACAAAATCTT CTTCACCCTC TATAGTATTT CACCTGAGAG TGCATGATTT 000560
000561 AAGTTGCAAG CACTGTCATA GATGATGGGA TTCAGAGATG AACACATGGA AATGGACTTT ATGTTCTCTA ATGTCACAAA 000640
000641 GAAAGAGTGA TTATGAAGAA GACCCAGATT CCCACCTATT AATCTGAGCT TTGAATTCTT TACTTTGCTG GGTCCACCGG 000720
000721 ATTTTTTCTC CACTCAGCCC ATCGATGAGA GTGGAGGCGG CCTGCATCTT TTTCCGCATC TCCACAGTCA AATCCCTGAT 000800
000801 TTGCCAGAGA TGATCAAGAC TGCAACTTTT TATTGAGCAG CTCAATCAAG AACTAATTGT GTTTTCCTGT GCTCCAATAG 000880
000881 CTATCACCAA AAAGCTATCT CCACTACCAC TCAATCATCT CTTTAAAATG TCCAGGGGTG CCCTCTGTAC TTTGACTCAG 000960
000961 AGTCAGTCTA ATCAACTCTG GCTCCAAAAT ACTTAACTAA TTTTTGCACC ATTAAGCATC TGTATACCAT GGTGTAGGGA 001040
001041 AGAGTTAACA CAGCAGGCCT AATCTTGAAA AGGGTATGCT TGCAGAGCTG ACCCTTGTCT GTTATCAGGG AACTTGGCTT 001120
001121 TTGGAATGTC TCCTCCATTA GTAATTGATA AGGTTGTTTT GCAGTGCCAA CTAGACTGTT TACACAAACC TTGTGATACA 001200
001201 TGGCAAACAT CTATCTGCTT TCCTTCTAGG AATCTGGAAC TTTGGTAGTT GTAGCTAGGC AGGAAGTGAC CAAACCTAAA 001280
001281 AAAAAACCAC TGGACTCTGA ATCTCAAGTG GGCTTCCCTG AATGGAAACA GTGCATATGT TACTGCCCTT CATACTGGAT 001360
001361 GGAGAGGACG TTCTGCATGG CCCCTTGGCA AAAGCATAGG AAGCTGGAAC ATCAATTCCA TGTTCCTGGA ACATCGATGA 001440
001441 CTCCACAAGA TGAGTCTTTT TCTCTACTGA TCTGGCTCCG TATCCTTACT GTGTTGCCAC AATAAATCTC AGCCATGAGT 001520
001521 ATAACTATAA GTTGAACATC CCTTATTCAA AATGCTTGGG ACCACAATGT TTCAGATTTC AGATTTTTTT CAGATTTTGG 001600
001601 AATGTTTGCA TTTCACTTAC TGGTTGAGCA CCCCCAAATC AAAAAATCTG AAATCTAAAA TGCTCCAATA ATGAGCATGT 001680
001681 CCTTTGAGCA TCATGTCCGT GCTCAAAAAG TTTCAGATTT TGGAGCATTT TGGATTCCAG AGTTTTGGAT TTGAGAAGCT 001760
001761 CGACCTGTAT ATGCTGAGTC TGGTGAGTCT TTCTGATGAA GTACTAAAGA TGTGAGTGCT CACGGAAGTG CTGATACAAG 001840
001841 CGGTTTCAGA AGTGGCAGTA CAGACATCCA TTTACAACTA ACAGAACTCT TTCAACCATT CTATACTCCT CACTAGTATG 001920
001921 CAGATAGATG GACAGATACT TTGCTTCTCC TAAAATAAAT TATAAGACCA AAGTGAAGAC TGAAGAGACA AGTAAGGAAC 002000
002001 CATGTTCAAA ATTAAACAAA GCATCTGGAG ATGGGCAGCA TTCATTTCAC AGGAACTTCA GAAAATCTGC TAAATCTCGT 002080
002081 ACATTAACCA TGTCTAAAAT AAAAAATGTA CTAAATAGCA AAAAAAAAAA AAAAAAAAAA
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Predicted Small Protein

Name NONHSAT112336_smProtein_29:202
Length 58
Molecular weight 6814.6281
Aromaticity 0.0701754385965
Instability index 57.1315789474
Isoelectric point 9.23590087891
Runs 11
Runs residual 0.0390350877193
Runs probability 0.0496137849079
Amino acid sequence MFCHVEKNERVHPQIEVWHDDLAAQRRTCLSHLKWEVKPSRGKQQLESRFANQKSNS
Secondary structure LEEEELLLLLLLLLEEEELHHHHHHHHHHHHLLLEEELLLLLHHHHHHHHHHLLLLL
PRMN -
PiMo -