NONHSAT112461
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112461 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
641 nt |
Genomic location |
chr6+:40253978..40255798 |
Exon number |
2 |
Exons |
40253978..40254157,40255338..40255798 |
Genome context |
|
Sequence |
000001 ACCGGTGGCA GCAGCAGCTC AGGAGTCTCT TAGGTTGGGC GGGGCTTGAA TCAATGATGA GGCTCTATTC TGAAACACCT 000080
000081 TTTGGTGTGA AGCGGGCTTC TCTTCTTTTT GAAGATGTGG GCGTGCGTCT GTGTGTTTGA TGGCGGGACA CAGAGGGTTG 000160 000161 GAGCTGGGGA AACACTTCAG gatgaaaagt attgttcctg atgcgtctgt gagggtgttg ccaaaggaga ttaacatatg 000240 000241 actcagtgga ctggaaaggc agacccaccc ttaatctgtc tgggcacaat ctaatcagct accagcattg ccagaataaa 000320 000321 tgcaggcaga agaatatgaa aagaccagac tggcttagcc tcccaggcta catctttctc ctgtgctgga tgcttcctgc 000400 000401 cctcgaacat cagactccaa gttcttcagc tttgggactt ggactggctt ccttgctcct cagtttgcag atggcctatt 000480 000481 gtgggaccta ttactcctta ataaattccc ctttatatat acatctatcc tattagttat gtccctctaa ggaaccctga 000560 000561 ctaatacatc aactctgcta gcttctggac ttccaagaac cagaactgta agaaaataaa tgtctattgt ttaagccaac 000640 000641 c |
Predicted Small Protein
Name | NONHSAT112461_smProtein_335:535 |
Length | 67 |
Molecular weight | 7423.7116 |
Aromaticity | 0.136363636364 |
Instability index | 56.6090909091 |
Isoelectric point | 6.68426513672 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0368309485957 |
Amino acid sequence | MKRPDWLSLPGYIFLLCWMLPALEHQTPSSSALGLGLASLLLSLQMAYCGTYYSLINSPL YIHLSY |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLE EEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLL LLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTooooo oooooo |