NONHSAT112685
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112685 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
741 nt |
Genomic location |
chr6+:40416182..40455602 |
Exon number |
2 |
Exons |
40416182..40416318,40454999..40455602 |
Genome context |
|
Sequence |
000001 CCATGAATAT ATACAAATTG TAAATTTACA ATAAAAGATA AAAATGAAAA AAATGAAATC TTTGCATCCT CCGTCAGCCC 000080
000081 TAATCTTTTG GATTCTTATC TTGCTGCAAT ACTCAAAAAG ATCAAATACA TAGATGGTTG GGGAGGTCAT CCAGTTCTAT 000160 000161 GGTGAGTAGA TCATTTATGC CAATGAGCCC CAAGTTCATG CCCTCAGCCC TGGCTTCACC TGAGCTCCAG ACTCACCATT 000240 000241 TGACTCTCAC TGACATCACC ACTGGGGTGC CTCACAGGTG CTCCAGATCT GGCAGGGCGT CAATGAGTTC TTGCTTCTTC 000320 000321 CCTTACACCT GTTCCTCCCG CAGCCTTCCT CATCTCACTA AATGGCAACT CCATGGAGCC TATCCTTGCA TCTCTGCAAA 000400 000401 ATGCACACAT CCCGAAAAAG TCGGCAGATG GGAAAGGGAG GTAGGCAGAT AGCTGTGAAA GGTGCATGGC CTCTGGCTTT 000480 000481 TGGAAGGATG ACCAGAAGGG ATGGCTGGAA GCCCAAAGAA CTGTGAAACT GATGGGGGAA AGTCAATGGG TTTCATCAGT 000560 000561 GAATCCAAGG ATGGGATGGC TAGGATTTGG AAGTGTAAAA AGATACATGT CAGGATGAAA CCAAAGGAAG CTACCAGGCC 000640 000641 CACTGTGTAT TTCCACATGG AGTGCCGCTG CCCACCCTTC CCAGCTGTCT GCTGGAGGTA TCCTGTGCCT TTCATCCAAA 000720 000721 TCCTACTTTT TCTCTGCATC C |
Predicted Small Protein
Name | NONHSAT112685_smProtein_158:451 |
Length | 98 |
Molecular weight | 10907.5222 |
Aromaticity | 0.0824742268041 |
Instability index | 81.2072164948 |
Isoelectric point | 9.65631103516 |
Runs | 15 |
Runs residual | 0.0231004200076 |
Runs probability | 0.0336630748395 |
Amino acid sequence | MVSRSFMPMSPKFMPSALASPELQTHHLTLTDITTGVPHRCSRSGRASMSSCFFPYTCSS RSLPHLTKWQLHGAYPCISAKCTHPEKVGRWEREVGR |
Secondary structure | LLLEELLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLLLLLLLLEEEELLEELLLLLL LLLLLLLHHHHLLLLLLEELLLLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |