NONHSAT112693
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112693 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
613 nt |
Genomic location |
chr6-:40789128..40791080 |
Exon number |
3 |
Exons |
40789128..40789180,40790013..40790115,40790624..40791080 |
Genome context |
|
Sequence |
000001 TGCTCTCTTA GAGCCACCTG CCCAGCCAGT CAGTGCCTGT TACTTTGATG CCTGAGCCTG GCATGCAGGG ACCCTCGTCC 000080
000081 AAGTCACCCA GACACCATCA ACAGCCTCAA TGGCATCTGA CCCTCTTCAG AGCTGCTGAG ACATCAGCAC CTTTCCCTGA 000160 000161 GCTTCTAAAA ACCCCATCCT TGCCCCCTTT ATTCTCCTGG CCTGGAGGGT GTCGCTGCAG TGGTCGCCTT TGCCTTTTCA 000240 000241 GCTCTCCAGT ATCTGTTATC TAATTCCTTT TGTGAAATTT CTTCTGTTAA CAAACTGATG CTGAGTCTCT TTTCCTGACC 000320 000321 TCATCCTGAC TGAAAGGCAC CTATATCTTC ATACATGCTC TCTGCTTACT GTTTATGTAG CCATGGTGTT CGATGTGTCT 000400 000401 GTAGGTCATT TTCTGCCACG TAGAGCAATA AGAATTAGAT GGATGCATAT GTTTTTGCTA TAAGATGCAG ATTTAGGAGT 000480 000481 AGTACTCCTT CACATGCATG AATATGAAAT ATCCAGTGGT CTATTTGAGC AGAAAGTTTT TACTCATAGA AAGAACTTGT 000560 000561 ACGTGTAATT TATTACCACC ACTTGCATGC CTTGAACACT TCTCCCACCT TCC |
Predicted Small Protein
Name | NONHSAT112693_smProtein_47:262 |
Length | 72 |
Molecular weight | 7797.9528 |
Aromaticity | 0.0845070422535 |
Instability index | 78.4774647887 |
Isoelectric point | 9.14971923828 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.0366795366796 |
Amino acid sequence | MPEPGMQGPSSKSPRHHQQPQWHLTLFRAAETSAPFPELLKTPSLPPLFSWPGGCRCSGR LCLFSSPVSVI |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLE EEEELLLLEEL |
PRMN | - |
PiMo | - |