NONHSAT112787
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT112787 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
432 nt |
Genomic location |
chr6-:41978576..42016440 |
Exon number |
2 |
Exons |
41978576..41978805,42016239..42016440 |
Genome context |
|
Sequence |
000001 GGCGCGGACT TTGTAAACAC TTCGCCACTG CAGGGGTGGA GACTGGCTCT GTTCGGATGC CGGCCGGGGG GGAGAGGTGC 000080
000081 AATCCTCTCC TCGCGGCTGG TGGTTGCGAC CACCCCCACT CCCCAAAGGC AGGCTCCGGA GGCGGCGGGA CAGAGCGCCT 000160 000161 GCGACCCCAG TCGGTGCTCC GGGGAGGTCA CCTGACGAGG AGTTGTTCTT ACAGATTCAA GAATCACTTT TGAAAGCCTT 000240 000241 CATTGGATCC TTGTGAAATG ACCGATTGAC TGCTTGGATG AACTCCTGAA GTGTTTCTAT GGAGGACAGA CCAAGAGGAA 000320 000321 ACTTAATATt tcctctcaat tttcctgtga aactaaaact gtgctaaaaa acagtctatt tagaaaAAAA GAAGAAGATA 000400 000401 GTTGCCTATA GAGGAACTAA AGAATGTTGT GG |
Predicted Small Protein
Name | NONHSAT112787_smProtein_56:232 |
Length | 59 |
Molecular weight | 6087.7918 |
Aromaticity | 0.051724137931 |
Instability index | 69.2465517241 |
Isoelectric point | 9.88482666016 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0297258042356 |
Amino acid sequence | MPAGGERCNPLLAAGGCDHPHSPKAGSGGGGTERLRPQSVLRGGHLTRSCSYRFKNHF |
Secondary structure | LLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLEEELLLEEEELLLEEEEEEEEEELLL |
PRMN | - |
PiMo | - |