NONHSAT112919

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT112919

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2746 nt

Genomic location

chr6+:43745457..43754176

Exon number

3

Exons

43745457..43746273,43746626..43746655,43752278..43754176

Genome context

Sequence
000001 TGGGAACAGG TGGTCCCAGG TCGTTTCCTG GCTAGATTTG CCTTGTCTGG CTCCTGCCCC TGAGTTGCAC AGGGGAGGTA 000080
000081 TGGTGGGGTC TTGCCTTCTG TGGAGAAGAT GCTTCATTCC CAGCCCAGGT TCCCAGCAAG CCCCAACCAT CTCCTTCTCC 000160
000161 CTGATGGTTG CCCATGGGCT CAGGAGGGGA CAGATGGATG CCTGTGTCAG GAGCCCCTCT CTCCCTCTCT TGGAGAGAGT 000240
000241 CCTGAGTGCC CCCCCTTCTT GGGGGCTTTG TTTGGGAAGC TGGATGAGCC TGGTCCATGG AGAGTTTAAA AAGTCTTTTG 000320
000321 GTGTTACCTG GTAATGGGGC ACATCTCAGC CCAGATAGGG TGGGAGGGAG CTGTGAAACA CAGGGAGGGG GTTGCTTTCG 000400
000401 GGTATCTACT AGGAGTCAGG GTGAAGCCTA GAGAGGATGA AAGAAGGGGA GGGGATGGGG AGTGGTAAGA ACCTAGGATT 000480
000481 TGAATTCCCA GCCTGGCCAA CCCTTGCAGC CATGTCTTGG CCTCAAGTGG AACAAGGGCT CCTTGAGGCC AGCAGGGTTG 000560
000561 GGGGAGTTGG GGTGGGCCTG AGCCTCTTTC CTGCTAGAGC TCTTGGTCCT CCCTGCCTCC ACCACCCATC CCTGCTCTGC 000640
000641 AGAACCCCTG GGTGCTGAGT GGCAGGAGCC CCAGGGTTGT CCCATCTGGG TATGGCTGGC TGGGTCACTA ACCTCTGTGA 000720
000721 TCTGCTTCCT TCCTTTCCAG ATTATGCGGA TCAAACCTCA CCAAGGCCAG CACATAGGAG AGATGAGCTT CCTACAGCAC 000800
000801 AACAAATGTG AATGCAGACC AAAGAAAGAT AGAGCAAGAC AAGAAAAATG TGACAAGCCG AGGCGGTGAG CCGGGCAGGA 000880
000881 GGAAGGAGCC TCCCTCAGGG TTTCGGGAAC CAGATCTCTC ACCAGGAAAG ACTGATACAG AACGATCGAT ACAGAAACCA 000960
000961 CGCTGCCGCC ACCACACCAT CACCATCGAC AGAACAGTCC TTAATCCAGA AACCTGAAAT GAAGGAAGAG GAGACTCTGC 001040
001041 GCAGAGCACT TTGGGTCCGG AGGGCGAGAC TCCGGCGGAA GCATTCCCGG GCGGGTGACC CAGCACGGTC CCTCTTGGAA 001120
001121 TTGGATTCGC CATTTTATTT TTCTTGCTGC TAAATCACCG AGCCCGGAAG ATTAGAGAGT TTTATTTCTG GGATTCCTGT 001200
001201 AGACACACCC ACCCACatac atacatttat atatatatat attatatata tataaaaata aatatctcta ttttatatat 001280
001281 ataaaatata tatatTCTTT TTTTAAATTA ACAGTGCTAA TGTTATTGGT GTCTTCACTG GATGTATTTG ACTGCTGTGG 001360
001361 ACTTGAGTTG GGAGGGGAAT GTTCCCACTC AGATCCTGAC AGGGAAGAGG AGGAGATGAG AGACTCTGGC ATGATCTTTT 001440
001441 TTTTGTCCCA CTTGGTGGGG CCAGGGTCCT CTCCCCTGCC CAGGAATGTG CAAGGCCAGG GCATGGGGGC AAATATGACC 001520
001521 CAGTTTTGGG AACACCGACA AACCCAGCCC TGGCGCTGAG CCTCTCTACC CCAGGTCAGA CGGACAGAAA GACAGATCAC 001600
001601 AGGTACAGGG ATGAGGACAC CGGCTCTGAC CAGGAGTTTG GGGAGCTTCA GGACATTGCT GTGCTTTGGG GATTCCCTCC 001680
001681 ACATGCTGCA CGCGCATCTC GCCCCCAGGG GCACTGCCTG GAAGATTCAG GAGCCTGGGC GGCCTTCGCT TACTCTCACC 001760
001761 TGCTTCTGAG TTGCCCAGGA GACCACTGGC AGATGTCCCG GCGAAGAGAA GAGACACATT GTTGGAAGAA GCAGCCCATG 001840
001841 ACAGCTCCCC TTCCTGGGAC TCGCCCTCAT CCTCTTCCTG CTCCCCTTCC TGGGGTGCAG CCTAAAAGGA CCTATGTCCT 001920
001921 CACACCATTG AAACCACTAG TTCTGTCCCC CCAGGAGACC TGGTTGTGTG TGTGTGAGTG GTTGACCTTC CTCCATCCCC 002000
002001 TGGTCCTTCC CTTCCCTTCC CGAGGCACAG AGAGACAGGG CAGGATCCAC GTGCCCATTG TGGAGGCAGA GAAAAGAGAA 002080
002081 AGTGTTTTAT ATACGGTACT TATTTAATAT CCCTTTTTAA TTAGAAATTA AAACAGTTAA TTTAATTAAA GAGTAGGGTT 002160
002161 TTTTTTCAGT ATTCTTGGTT AATATTTAAT TTCAACTATT TATGAGATGT ATCTTTTGCT CTCTCTTGCT CTCTTATTTG 002240
002241 TACCGGTTTT TGTATATAAA ATTCATGTTT CCAATCTCTC TCTCCCTGAT CGGTGACAGT CACTAGCTTA TCTTGAACAG 002320
002321 ATATTTAATT TTGCTAACAC TCAGCTCTGC CCTCCCCGAT CCCCTGGCTC CCCAGCACAC ATTCCTTTGA AATAAGGTTT 002400
002401 CAATATACAT CTACATACTA TATATATATT TGGCAACTTG TATTTGTGTG tatatatata tatatatgtt tatgtatata 002480
002481 tGTGATTCTG ATAAAATAGA CATTGCTATT CTGTTTTTTA TATGTAAAAA CAAAACAAGA AAAAATAGAG AATTCTACAT 002560
002561 ACTAAATCTC TCTCCttttt taattttaat atttgttatc atttatttat tGGTGCTACT GTTTATCCGT AATAATTGTG 002640
002641 GGGAAAAGAT ATTAACATCA CGTCTTTGTC TCTAGTGCAG TTTTTCGAGA TATTCCGTAG TACATATTTA TTTTTAAACA 002720
002721 ACGACAAAGA AATACAGATA TATCTT
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Predicted Small Protein

Name NONHSAT112919_smProtein_1319:1558
Length 80
Molecular weight 8868.8558
Aromaticity 0.0759493670886
Instability index 41.2227848101
Isoelectric point 4.59344482422
Runs 11
Runs residual 0.00104040228889
Runs probability 0.0444107208813
Amino acid sequence MLLVSSLDVFDCCGLELGGECSHSDPDREEEEMRDSGMIFFLSHLVGPGSSPLPRNVQGQ
GMGANMTQFWEHRQTQPWR
Secondary structure LEEEEELLEEELLLLLLLLLLLLLLLLHHHHHHHLLLEEEEEEEELLLLLLLLLLLLLLL
LLLLLHHHHHHHHLLLLLL
PRMN -
PiMo -