NONHSAT112952
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112952 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
819 nt |
Genomic location |
chr6+:44184632..44185931 |
Exon number |
2 |
Exons |
44184632..44184705,44185187..44185931 |
Genome context |
|
Sequence |
000001 GCTGAATCCA GTGGGGCTAT CTCCACTCCA GGCAAATCCA GCCAGAGACT GATTCTGAGC AGCAGTTCTG CCCGGCACTG 000080
000081 ACTCACTGGC CCTGCCATGC CCACGCCACT GCTCCCGCTG CTGCTTCGAT TGCTGCTGTC CTGCCTGCTG CTGCCTGCTG 000160 000161 CCCGCCTGGC CCGCCAATAC CTCCTGCCCC TGCTGCGCCG ATTGGCCCGC CGCCTGGGCT CCCAGGACAT GCGAGAGGCT 000240 000241 TTGCTGGGCT GTCTGCTGTT CATTCTCAGC CAGCGACACT CGCCAGACGC TGGGGAGGCC TCAAGAGTGG ACCGCCTGGA 000320 000321 GAGGAGGGAG AGGTTAGGCC CCCAAAAGTG AGGCCACAAG TCCTGGCAGC AGCTGTATCC ACAAAATGCT TTCTTTTGGA 000400 000401 GTAGGATAAT CCTGGCACCA GCACTGACCG AAGCCTGCCC AGTGGACAGA AGATATAGTG AGGGTTGTGC ATGAGAGGGA 000480 000481 TCTGCCACAG ACATGCCTCT CCACTCCCAA CAGAAATGTC TTTCTGGAAG AATGCCTTGC ATCTAGCACA AAACTGATTA 000560 000561 TTGCCCCTCT GTCCTCCAGC AGTTCCTCCC AAAGACCACT CCTAATCACC TCTGGCCTCA GGCGGGAGGG GAACTAACAC 000640 000641 CCACCCACCC CTGCCCTCCC TGCAAATGGG AACATCAAGG TTCCCAGTGC TTAACTGAGG GACAAGTGAC AATTTAGCAG 000720 000721 AGAGGCAAGA TTTGAATCCA GACTGTCTTC CAGACTCAGG ACCTACCTTA AAATAATATC TGAGTTGCTT ATGGAGGCAG 000800 000801 ACCTGCCTGC AAAGCCCAG |
Predicted Small Protein
Name | NONHSAT112952_smProtein_470:556 |
Length | 29 |
Molecular weight | 3246.7482 |
Aromaticity | 0.0714285714286 |
Instability index | 64.55 |
Isoelectric point | 9.49737548828 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0437731849496 |
Amino acid sequence | MRGICHRHASPLPTEMSFWKNALHLAQN |
Secondary structure | LLLEELLLLLLLLLHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |